Re: [Gusdev-gusdev] parseBlastFilesForSimilarity.pl

[Alberto D. <da...@io...>]

Hi Steve,

On Fri, 2005-02-11 at 08:56 -0500, Steve Fischer wrote:
> poliana-
> 
> oops, the usage statement for LoadBlastSimFast is out of date.   it 
> should instruct you to use the blastSimilarity command.
> 
> LoadBlastSimFast makes a big assumption, that the subject and query 
> sequences are in GUS, and their def. lines have GUS primary keys. 
> 
> Are your sequences already loaded into GUS?

They are not, there would be any howto/tips for that plugin ? We will
certainly need a plugin to load "Interpro" and "ORF finding" results
into GUS... If they are not available, then maybe we will have to write
them ...

Cheers, Alberto

> 
> steve
> 
> 
> 
> Poliana Mateus wrote:
> 
> >Hello all,
> >
> >Where can find the script parseBlastFilesForSimilarity.pl??
> >I'm trying to run LoadBlastSimFast...
> >
> >Poliana
> >
> >