Re: [Gusdev-gusdev] GUS 3.5 Release

[Michael S. <msa...@pc...>]

Hi Alberto and all,

I'm replying to my own post here, after speaking with Chris and Steve 
here.  GUS doesn't currently support phylogeny/evolutionary data, but 
are very open to adding it to GUS.  Do you have a schema (rough or 
otherwise) in mind?

--Mike


Michael Saffitz wrote:
> 
> Hi Alberto,
> 
> My comments are below...
> 
> 
> Alberto Davila wrote:
> 
>> Hi Mike,
>>
>> I have 3 questions for you:
>>
>> a) Such as Sucheta, I wonder we will be able to move from GUS 3.0 to 3.5
>> without big problems
>>
> 
> Yes, in short.  See my previous email to Sucheta and the list with more 
> details.
> 
>> b) Will 3.5 support (be compatible) with Postgres ? That would be bad to
>> have to debug/port it "again" to Postgres..
>>
> 
> Yes, official PostgreSQL support is a major enhancement to GUS in 3.5. 
> It's worth noting:  GUS _does not_ currently support Postgres.  The work 
> that has been done and released was very preliminary work, provided 
> because there were many groups out there who absolutely needed something 
> ASAP.  The Postgres support in 3.5 will be different than what was 
> previously sent by me-- it more closely resembles the last round of 
> scripts sent by Jeetendra.
> 
>> c) I went to the wiki site you mentioned, but was unable to enter/open
>> the BrowseSchema, so... will 3.5 support or have tables for
>> phylogeny/evolutionary data (distance, maximum likelihood and
>> bayesian)  ?
> 
> 
> Sorry about that-- the SchemaBrowser linked from those pages is now 
> working.  I'm not aware of any additional tables for this type of data, 
> perhaps someone more knowledgeable with this can let the list know if 
> tables to support this data already exist?
> 
> --Mike
> 
>>
>> Thanks, Alberto
>>
>> On Tue, 2005-01-25 at 11:15 -0500, Michael Saffitz wrote:
>>
>>> All,
>>>
>>> As you may be aware, we've been working towards a GUS 3.5 release for 
>>> quite some time now.  There is now a wiki page, available at:
>>>
>>> http://gusdb.org/wiki/index.php/Gus3.5RoadMap
>>>
>>> which outlines the major changes that are planned for GUS 3.5.  These 
>>> items are the result of many conversations here at CBIL and with our 
>>> collaborators.
>>>
>>> 3.5 is primarily intended to be a maintenance release, to be 
>>> eventually followed with 4.0 which will be a major feature release.  
>>> Having said that, we're interested in feedback on any (high priority) 
>>> pressing issues that have been omitted from the road map above and 
>>> should be considered for 3.5.
>>>
>>> Thanks,
>>>
>>> Mike Saffitz
>>
>>
>>
>>
>>
>>
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> 
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