Re: [Gusdev-gusdev] GBParser problems

[Sucheta T. <su...@vb...>]

Hi Jinal,

I know why it is happening. I have uploaded all the files in your home 
directory.I have commented somewhere in make_genbank.pl program about this 
error.

Please check that. I have also uploaded the sample files onto your home 
directory.

--sucheta


At 11:27 AM 10/11/2004 -0400, Jinal Jhaveri wrote:
>I am trying to load a genbank file and the gbparser keeps giving me this
>message and finally goes out of memory and dies. Any idea what can be the
>problem? This genbank file was created by me from our newly sequenced genome
>and I am pretty sure that there is something missing in the format which the
>gbparser expects and that's why it dies. I validated my genbank file against
>"sequin" available from ncbi and everything looks good.
>
>Here is the message (the line "VLD     CBIL::Bio::GenBank::Origin      1" 
>goes
>on and on)
>
>VLD     CBIL::Bio::GenBank::Features    1
>VLD     CBIL::Bio::GenBank::BaseCount   1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>VLD     CBIL::Bio::GenBank::Origin      1
>
>
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