[Gusdev-gusdev] GBParser problems

[Jinal J. <jjh...@vb...>]

I am trying to load a genbank file and the gbparser keeps giving me this 
message and finally goes out of memory and dies. Any idea what can be the 
problem? This genbank file was created by me from our newly sequenced genome 
and I am pretty sure that there is something missing in the format which the 
gbparser expects and that's why it dies. I validated my genbank file against 
"sequin" available from ncbi and everything looks good. 

Here is the message (the line "VLD     CBIL::Bio::GenBank::Origin      1" goes 
on and on)

VLD     CBIL::Bio::GenBank::Features    1
VLD     CBIL::Bio::GenBank::BaseCount   1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1
VLD     CBIL::Bio::GenBank::Origin      1