From: Ed R. <ed_...@be...> - 2004-09-27 18:13:58
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Everything is parsing now, but I am still getting a SQL error so nothing is going in. Here is the SQL: INSERT INTO DoTS.NAEntry ( created_date, row_user_id, user_write, group_write, created_rel_ver, na_sequence_id, row_project_id, group_read, row_group_id, other_read, na_entry_id, source_id, modification_date, user_read, row_alg_invocation_id, other_write, version, division ) VALUES ( ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, SYSDATE, ?, ?, ?, ?, ? ) Values: 2004-4-05 00:00:00, 1, 1, 1, AAEE0100000000, 43, 1, 1, 1, 1, 43, AAEE01000001, 1, 104, 0, 1, INV As far as I can tell, it's all good except for the format of the date. Here is the full error from the error log. All 18 chromosomes return the same error: Again, thanks for everyone's help on this. -Ed ---- ------------------ entry number 1 ----------------- SQL ERROR!! involving INSERT INTO DoTS.NAEntry ( created_date, row_user_id, user_write, group_write, created_rel_ver, na_sequence_id, row_project_id, group_read, row_group_id, other_read, na_entry_id, source_id, modification_date, user_read, row_alg_invocation_id, other_write, version, division ) VALUES ( ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, ?, SYSDATE, ?, ?, ?, ?, ? ) Values: 2004-4-05 00:00:00, 1, 1, 1, AAEE0100000000, 43, 1, 1, 1, 1, 43, AAEE01000001, 1, 104, 0, 1, INV at /var/local/GUSTest/gus_home/lib/perl/GUS/ObjRelP/DbiDbHandle.pm line 185 GUS::ObjRelP::DbiDbHandle::death('GUS::ObjRelP::DbiDbHandle=HASH(0x8ab7b78)', '^J SQL ERROR!! involving^J ^J INSERT INTO DoTS.NAEntry ( create...') called at /var/local/GUSTest/gus_home/lib/perl/GUS/ObjRelP/DbiDbHandle.pm line 148 GUS::ObjRelP::DbiDbHandle::sqlExec('GUS::ObjRelP::DbiDbHandle=HASH(0x8ab7b78)', 'GUS::ObjRelP::DbiDbHandle::st=HASH(0x9ce0958)', 'ARRAY(0x9ce0808)', '^J INSERT INTO DoTS.NAEntry ( created_date, row_user_id, user...') called at /var/local/GUSTest/gus_home/lib/perl/GUS/ObjRelP/DbiRow.pm line 681 GUS::ObjRelP::DbiRow::quote_and_insert('GUS::Model::DoTS::NAEntry=HASH(0x949ea18)', 'HASH(0x9cc906c)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/ObjRelP/DbiRow.pm line 628 GUS::ObjRelP::DbiRow::insert('GUS::Model::DoTS::NAEntry=HASH(0x949ea18)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/Model/GusRow.pm line 1677 GUS::Model::GusRow::submit('GUS::Model::DoTS::NAEntry=HASH(0x949ea18)', undef, 1) called at /var/local/GUSTest/gus_home/lib/perl/GUS/Model/GusRow.pm line 1764 GUS::Model::GusRow::submitChildrenInClass('GUS::Model::DoTS::ExternalNASequence=HASH(0x94a084c)', 'GUS::Model::DoTS::NAEntry') called at /var/local/GUSTest/gus_home/lib/perl/GUS/Model/GusRow.pm line 1745 GUS::Model::GusRow::submitAllChildren('GUS::Model::DoTS::ExternalNASequence=HASH(0x94a084c)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/Model/GusRow.pm line 1684 GUS::Model::GusRow::submit('GUS::Model::DoTS::ExternalNASequence=HASH(0x94a084c)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/Common/Plugin/GBParser.pm line 284 GUS::Common::Plugin::GBParser::processEntry('GUS::Common::Plugin::GBParser=HASH(0x8106d54)', 'CBIL::Bio::GenBank::ArrayStream=HASH(0x90e130c)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/Common/Plugin/GBParser.pm line 185 eval {...} called at /var/local/GUSTest/gus_home/lib/perl/GUS/Common/Plugin/GBParser.pm line 184 GUS::Common::Plugin::GBParser::run('GUS::Common::Plugin::GBParser=HASH(0x8106d54)', 'HASH(0x8d0a8f8)') called at /var/local/GUSTest/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 453 eval {...} called at /var/local/GUSTest/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 450 GUS::PluginMgr::GusApplication::doMajorMode_RunOrReport('GUS::PluginMgr::GusApplication=HASH(0x80fbb4c)', 'GUS::Common::Plugin::GBParser', 1) called at /var/local/GUSTest/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 383 GUS::PluginMgr::GusApplication::doMajorMode_Run('GUS::PluginMgr::GusApplication=HASH(0x80fbb4c)', 'GUS::Common::Plugin::GBParser') called at /var/local/GUSTest/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 289 GUS::PluginMgr::GusApplication::doMajorMode('GUS::PluginMgr::GusApplication=HASH(0x80fbb4c)', 'GUS::Common::Plugin::GBParser') called at /var/local/GUSTest/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 198 GUS::PluginMgr::GusApplication::parseAndRun('GUS::PluginMgr::GusApplication=HASH(0x80fbb4c)', 'ARRAY(0x8102dec)') called at /var/local/GUSTest/gus_home/bin/ga line 11 Ed Robinson 255 Deerfield Rd Bogart, GA 30622 (706)425-9181 http://www.electedrobinson.com --Learn more about the face of your neighbor, and less about your own. -Sargent Shriver |