From: Arnaud K. <ax...@sa...> - 2004-08-19 11:13:21
|
Hi I would like to know if there is anything already implemented to process homology data (gene clusters and orthologues data). Re. Orthologoues data, we use reciprocal blastp wrapper to generate the orthologous groups, giving a set of cutoff parameters. Re. clustering genes within a species into families, we blast a proteome against itself and then run tribe to generate a set of clusters and their members. Has anyone worked on processing such data for loading into GUS3 ? Thanks Arnaud |