[Gusdev-gusdev] Re: Enzyme File for LoadEnzymeDatabase

[Jonathan S. <js...@pc...>]

Jinal:

Sorry, I didn't realize how poorly documented that plugin is.  Please  
cvs update for a better version.  The help should answer your  
questions.  To run the plugin, make sure you also have  
GUS/PluginMgr/lib/perl/PluginUtilities.pm and  
PluginUtilities/ConstraintFunctions.pm

Jonathan

On Jul 19, 2004, at 12:46 PM, Jinal Jhaveri wrote:

> Hi Jonathan,
> I tried to use the LoadEnzymeDatabase plugin and didn't understand  
> which
> enzyme file, prosite db file, swissprot file and omim file is it  
> trying to
> use? Is this plugin documented anywhere? Any files / links to the  
> files which
> I can grab from the web?
>
> thank you
> Jinal,
> On Wednesday 14 July 2004 12:20 am, you wrote:
>> Jinal:
>>
>> Sorry for the delay.  The plugin is
>> GUS::Common::Plugin::LoadEnzymeDatabase.  We'll try to provide any
>> necessary documentation, but it it meant to work with the flat file
>> that you can pick up on the web.
>>
>> Jonathan
>>
>>
>> ---------------------------------------------------------------------- 
>> --
>> ---
>> Jonathan Schug            Center for Bioinformatics
>> js...@pc...     Computational Biology and Informatics Lab
>> (215) 573-3113 voice      University of Pennsylvania,
>> (215) 573-3111 fax        1413 Blockley Hall, Philadelphia, PA
>> 19014-6021