[Gusdev-gusdev] LoadBlastSimFast.pm

[Pablo N. M. <pa...@pa...>]

Hello dev folks,
I was getting errors when running the LoadBlastSimFast plug-in. It seems
to be due to an update in the Oracle.pm.

Error msg:
Can't locate object method "nextValSql" via package
"GUS::ObjRelP::Oracle" (perhaps you forgot to load
"GUS::ObjRelP::Oracle"?) at
/var/local/gus_home/lib/perl/GUS/Common/Plugin/LoadBlastSimFast.pm line
435, <GEN0> line 1654.

I found this line in the LoadBlastSimFast.pm
433:  my $nextvalSql =
$db->getDbPlatform()->nextValSql("dots.SimilaritySpan");

Then I changed to:
my $nextvalSql =
$db->getDbPlatform()->nextValVar("dots.SimilaritySpan");

Now it's working fine.

I don't know what is the standard procedure, but I'm reporting the error
so somebody with "The Power" :) who can fix and commit the changes to
the CVS.

Please let me know if there is a better way to proceed in cases like
this.

Best regards,
Pablo
-- 
-----------------------------
Pablo Nascimento Mendes
Research Scholar
Kissinger Lab
Department of Genetics
University of Georgia
C210 Life Sciences Bldg.
Athens, Georgia 30602
Phone:706 542-1447
E-mail: pa...@ug...