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Re: [Gusdev-gusdev] Problem installing new instance of GUS
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From: Dave B. <db...@pc...> - 2004-06-21 12:31:28
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Hi Madhura,
I know that by the end of this thread you had gotten past this by turning
on the --skipJavaCompiling flag. I would still like to solve the problem
though.
You got the CBIL project through one of the CBIL releases, correct? Was
it CBIL_v1-5-0? That release should include the missing libraries.
I know you downloaded the PerlTools library and installed that manually.
Did you do the same for the javax.servlet libraries? (I believe the name
of that one is servlet-api-2.4.jar). If not, can you see if the release
of CBIL you downloaded has this jar file? It should be in the directory
{PROJECT_HOME}/CBIL/CSP/lib/java
If you have indeed downloaded the latest release of the CBIL project, and
either the servlet jar file is not included or it is included and the
build is still failing, then something weird is going on and I will have
to take a look at it. But first, if you could give me that info, it would
help out a lot.
Thanks!
Dave
On Sat, 19 Jun 2004, Madhura Sudhakar Sharangpani wrote:
> Hi
> I am trying to install a new instance of GUS on a different UNIX machine
> and I am getting following error while building, I hadn't got this error
> while installing previous instance of GUS,
>
> while running build command for first time, after making reqd setings, I
> get following error:
>
> **********************************************************************
>
> [smadhura@asiago GUS]$ build GUS install -append
>
> ant -f /home/smadhura/Projects/install/build.xml install -Dproj=GUS -
> DtargetDir=/home/smadhura/GUS -Dcomp= -
> DprojectsDir=/home/smadhura/Projects -Dappend=true -logger
> org.apache.tools.ant.NoBannerLogger | grep ']'
>
> [echo] .
> [echo] Installing CBIL/Bio
> [echo] .
> [echo] Installing CBIL/CSP
> [javac] Compiling 26 source files
> to /home/smadhura/Projects/CBIL/CSP/classes
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/HTMLUtil.jav
> a:1873: package com.oroinc.text.perl does not exist
> [javac] protected final static com.oroinc.text.perl.Perl5Util util
> =
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Actio
> n.java:14: package com.oroinc.text.perl does not exist
> [javac] import com.oroinc.text.perl.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Item.
> java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Actio
> n.java:111: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.Action
> [javac] protected static Perl5Util perl = new Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Item.
> java:181: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.Item
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {}
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Item.
> java:197: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.Item
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Actio
> nItemGroup.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:15: package com.oroinc.text.perl does not exist
> [javac] import com.oroinc.text.perl.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:88: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.ItemGroup
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:97: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.ItemGroup
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:327: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.ItemGroup
> [javac] protected static Perl5Util perl = new Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/BoolP
> aram.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Param
> .java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/BoolP
> aram.java:89: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.BoolParam
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/BoolP
> aram.java:94: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.BoolParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Param
> .java:203: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.Param
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Param
> .java:208: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.Param
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Const
> antParam.java:12: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Const
> antParam.java:81: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.ConstantParam
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {}
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Doubl
> eParam.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Doubl
> eParam.java:126: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.DoubleParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/EnumP
> aram.java:14: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/EnumP
> aram.java:179: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.EnumParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/FreeT
> extParam.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/FreeT
> extParam.java:111: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.FreeTextParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/IntPa
> ram.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/IntPa
> ram.java:123: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.IntParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Multi
> Param.java:14: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Multi
> Param.java:113: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.MultiParam
> [javac] public void storeHTMLServletInput(HttpServletRequest rq) {
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Multi
> Param.java:118: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.MultiParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Passw
> ordParam.java:12: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Strin
> gEnumParam.java:14: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Strin
> gEnumParam.java:180: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.StringEnumParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/TreeE
> numParam.java:13: package javax.servlet.http does not exist
> [javac] import javax.servlet.http.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/TreeE
> numParam.java:15: package com.oroinc.text.perl does not exist
> [javac] import com.oroinc.text.perl.*;
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/TreeE
> numParam.java:79: cannot resolve symbol
> [javac] symbol : class HttpServletRequest
> [javac] location: class edu.cbil.csp.dialog.TreeEnumParam
> [javac] public boolean validateHTMLServletInput(HttpServletRequest
> rq, StringBuffer errors,
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/HTMLUtil.jav
> a:1874: package com.oroinc.text.perl does not exist
> [javac] new com.oroinc.text.perl.Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Actio
> n.java:111: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.Action
> [javac] protected static Perl5Util perl = new Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/ItemG
> roup.java:327: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.ItemGroup
> [javac] protected static Perl5Util perl = new Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/TreeE
> numParam.java:131: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.TreeEnumParam
> [javac] Perl5Util p5 = new Perl5Util();
> [javac] ^
>
> [javac] /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/TreeE
> numParam.java:131: cannot resolve symbol
> [javac] symbol : class Perl5Util
> [javac] location: class edu.cbil.csp.dialog.TreeEnumParam
> [javac] Perl5Util p5 = new Perl5Util();
> [javac] ^
> [javac]
> Note: /home/smadhura/Projects/CBIL/CSP/src/java/edu/cbil/csp/dialog/Action.
> java uses or overrides a deprecated API.
> [javac] Note: Recompile with -deprecation for details.
> [javac] 42 errors
>
> BUILD FAILED
> /home/smadhura/Projects/install/build.xml:26: Following error occured
> while executing this line
> /home/smadhura/Projects/GUS/build.xml:8: Following error occured while
> executing this line
> /home/smadhura/Projects/CBIL/build.xml:46: Following error occured while
> executing this line
> /home/smadhura/Projects/install/build.xml:216: Following error occured
> while executing this line
> /home/smadhura/Projects/install/build.xml:235: Compile failed; see the
> compiler
> error output for details.
>
> Total time: 12 seconds
> **********************************************************************
>
> I downloaded PerlTools.jar and have included it in my classpath but that
> still doesnot help
>
> Could smeone clarfy why am I getting this error?
>
> Thanks!
>
> Madhura
>
>
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