Re: [Gusdev-gusdev] LoadGoOntology

[Steve F. <st...@pc...>]

paul-   i have put version 1.5.0 on the download site  
http://www.cbil.upenn.edu/downloads/CBIL/releases/

dave-  i have added instructions to the cbil wiki.

steve

Dave Barkan wrote:

>Hey Paul,
>
>I recommitted the relevant files; Steve is in the process of creating the 
>new CBIL release.  When he is done, everything should work fine.
>
>Let me know how the LoadGoOntology plugin runs; it is newly refactored.  
>It works fine for me but I think you are the first to use it since, so 
>good luck ;-)  (There shouldn't be any problems).
>
>Dave
>
>On Wed, 9 Jun 2004, Paul Mooney wrote:
>
>  
>
>>Hi,
>>
>>I get an error when running the LoadGoOntology plugin.
>>It is up-to-date WRT cvs.
>>I have the CBIL_v1-4-0.tar.gz file, the Store.pm being identical to the 
>>one in my $GUS_HOME directory path.
>>Do I need a newer CBIL utilities ?
>>
>>Wed Jun  9 14:00:09 2004        loading all .ontology files in 
>>/nfs/team81/pjm/temp/GUS_installation/GO/ in preparation for parsing
>>Wed Jun  9 14:00:10 2004        parsing all .ontology files in 
>>preparation for inserting into database
>>Wed Jun  9 14:00:39 2004        parsing finished; loading ontology into 
>>database
>>Can't locate object method "getDescription" via package 
>>"CBIL::Bio::GeneOntologyParser::Store" (perhaps you forgot to load 
>>"CBIL::Bio::GeneOntologyParser::Store"?) at 
>>/nfs/team81/pjm/GUS/lib/perl/GUS/GOPredict/Plugin/LoadGoOntology.pm 
>>line 452.
>>
>>Paul.
>>
>>
>>
>>-------------------------------------------------------
>>This SF.Net email is sponsored by: GNOME Foundation
>>Hackers Unite!  GUADEC: The world's #1 Open Source Desktop Event.
>>GNOME Users and Developers European Conference, 28-30th June in Norway
>>http://2004/guadec.org
>>_______________________________________________
>>Gusdev-gusdev mailing list
>>Gus...@li...
>>https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>>
>>    
>>
>
>
>
>-------------------------------------------------------
>This SF.Net email is sponsored by: GNOME Foundation
>Hackers Unite!  GUADEC: The world's #1 Open Source Desktop Event.
>GNOME Users and Developers European Conference, 28-30th June in Norway
>http://2004/guadec.org
>_______________________________________________
>Gusdev-gusdev mailing list
>Gus...@li...
>https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>  
>