Re: [Gusdev-gusdev] LoadGoOntology

[Steve F. <st...@pc...>]

paul-

it looks like Dave did not commit his latest changes to cvs.

he'll be in later tofday.

sorry about that,
steve

Paul Mooney wrote:

> Hi,
>
> I get an error when running the LoadGoOntology plugin.
> It is up-to-date WRT cvs.
> I have the CBIL_v1-4-0.tar.gz file, the Store.pm being identical to 
> the one in my $GUS_HOME directory path.
> Do I need a newer CBIL utilities ?
>
> Wed Jun  9 14:00:09 2004        loading all .ontology files in 
> /nfs/team81/pjm/temp/GUS_installation/GO/ in preparation for parsing
> Wed Jun  9 14:00:10 2004        parsing all .ontology files in 
> preparation for inserting into database
> Wed Jun  9 14:00:39 2004        parsing finished; loading ontology 
> into database
> Can't locate object method "getDescription" via package 
> "CBIL::Bio::GeneOntologyParser::Store" (perhaps you forgot to load 
> "CBIL::Bio::GeneOntologyParser::Store"?) at 
> /nfs/team81/pjm/GUS/lib/perl/GUS/GOPredict/Plugin/LoadGoOntology.pm 
> line 452.
>
> Paul.
>
>
>
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