Re: [Gusdev-gusdev] wdk-question

[MICHAEL L. <lu...@cs...>]

Sucheta-
I have tried the third query, Quick Search for dots genes, with the values
1 and DG.1
Both times I get the following:
Official gene name/symbol from MGI or HUGO
kit

Gene description
test gene

Gene synonyms
*** None ***

Gene Model assigned to this gene
Query failed, please try again later:

java.sql.SQLException: ORA-00942: table or view does not exist


DoTS Transcripts linked to this gene
Query failed, please try again later:

java.sql.SQLException: ORA-00936: missing expression


Seems like it is working, except I assume the last parts you have not
fixed or do not have the data in for yet.

Michael Luchtan
http://www.cs.uga.edu/~luchtan


On Mon, 7 Jun 2004, Sucheta Tripathy wrote:

> Yes, it is not a compilation issue, and should not be an issue with
> environment variables either since I face problems at the web-browser level.
>
> I have freshly re-compiled the java sources and it works fine here, if some
> one can just try from outside at
> http://tyler-lab.bioinformatics.vt.edu/phytophthora/
>
> and login to the site with login psojae and password Psojae and go to the
> query.html page.
>
> Since the database is not having all the values, I have something for the
> third query(at quick search for dots gene). It has a value 1. Here if I
> provide 1, it queries the database properly, but if I do it from outside
> the network, it does not move.
>
> Anyone had a similar problem?
>
> At 03:28 PM 6/7/2004 -0400, Angel Pizarro wrote:
> >Sucheta Tripathy wrote:
> >
> >>
> >>I am facing a strange problem every time I recompile. If I do the
> >>re-compilation from office then querying from all computers in the
> >>network works fine, but fails to work from outside and vice versa.
> >OK, this is strange, but it is not a compiliation issue. A compilation
> >issue would mean that you cannot compile the java files from
> >cbil.gus.servlet package
> >
> >It also sounds liek you are installing to/from different places and/or
> >using different environment variables depending on where you are
> >installing the site from. In either case, this does not seem like an issue
> >for the list in general. Please look at all of you environment and sources
> >to make sure they are the same. If you are still having problems, the
> >person that could help you the most is probably your systems
> >administrator. As a last resort, please provide a more complete
> >description of the problem, with examples if possible, and send it to the
> >list again. Someone may have run into a similar situation, but we need
> >more detail
> >
> >Angel
> >
> >>Any idea why this might be happening?
> >>
> >>If I will not need to restart tomcat or re-compile it will be great.
> >>
> >>Thanks
> >>
> >>Sucheta
> >
>
>
>
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