Re: [Gusdev-gusdev] GBParser - problems with the perl modules

[Steve F. <sfi...@pc...>]

thomas-

i tested your file.   i found the problem.  it is the last line of the file:

    40921 cctcttccac ttcgtttcat tcttccaaca cctgcagccc caaatccatt tctaccgtct
    40981 acaagagttg gaggtctttc tcataatcat ctattcattc cccatcaacc gtttactact
    41041 cttgtttcga ccgattctag atattctgca ccgaaccctc tttctcatcg acttccaaac
    41101 gagatttgcc gagttcatat gaattcaaat cctttccatt tttagtttta ttactctacc
    41161 aaataattaa acagactttt cctatcgggt cccctaattt tctttcattt ttcaggcatc
    41221 tcggttgttt ttttcaaagt attttgacct aattttccat gttgaaatta ataaaatatt
    41281 tattaaatga acacaaacac agatgttgga attgtcttct tctggtcaag tactggatat
    41341 actctctttt tttgataatg ctgaattga
//

the '//' is confusing the parser into thinking that there is another 
record.   to workaround this bug, delete that line.

steve

Thomas Otto wrote: