[Gusdev-gusdev] LoadNRDB: table not found

[Chetna W. <wa...@ya...>]

Hello,

I am getting following error while I am trying to load
NRDB into GUS. Which table is it complaining for, I
tried with --debug or --verbose but ga didnt show any
useful error message. I will appreciate any help.


ga GUS::Common::Plugin::LoadNRDB --temp_login chetna
--sourceDB 'GENBANK (NRDB):gb,EMBL DATA LIBRARY
(NRDB):emb,DDBJ (NRDB):dbj,NBRF PIR (NRDB):pir,PROTEIN
RESEARCH FOUNDATION (NRDB):prf,SWISS-PROT
(NRDB):sp,BROOKHAVEN PROTEIN DATA BANK
(NRDB):pdb,PATENTS (NRDB):pat,GENINFO BACKBONE ID
(NRDB):bbs,GENERAL DATABASE IDENTIFIER (NRDB):gnl,NCBI
REFERENCE SEQUENCE (NRDB):ref,LOCAL SEQUENCE
IDENTIFIER:lcl' --temp_password chetna123 --dbi_str
'dbi:Oracle:host=kiwi.rcr.uga.edu;sid=CTEGD' --gitax
/home/chetna/gus-app/ncbi-taxonomy/gi_taxid_prot.dmp
--nrdb
/opt/app/oracle/db_storage/data/downloadNRDB/downloadNRDB/nr.Z
--extDbRelId 15 --plugin --delete
Wed Dec  3 17:09:57 2003        **COMMIT TURNED OFF**

There are 12 entries in the database hash
Wed Dec  3 17:10:30 2003        There are 3233042 gi
to taxon_id pairs

DBD::Oracle::db prepare failed: ORA-00942: table or
view does not exist (DBD ERROR:
OCIStmtExecute/Describe) at
/var/local/gus_home/lib/perl/GUS/ObjRelP/DbiDbHandle.pm
line 78.
prepareAndExecute FAILED:
GUS::ObjRelP::DbiDbHandle=HASH(0x86c9d48)->errstr

Thanks,
Chetna



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