Re: [Gusdev-gusdev] missing Workflow modules

[Steve F. <sfi...@pc...>]

Dear Greg-

We have not been maintaining the prototype Workflow system.

However, as Chris mentions, we have been using a simpler, basically 
serial pipeline system successfully to manage the massive process (3 
months) of building our DoTS/AllGenes transcript index.

I have attached the dots build pipeline.  Also take a look at the 
GUS/Pipeline component.   When you see mention of the "liniac" that is 
the name of our compute cluster.  The Pipeline API includes some special 
case handling of it, which probably won't be pertinent to you.

I'd be glad to answer questions.

Steve

Chris Stoeckert wrote:

> Hi Greg,
> Those modules were developed as a prototype workflow for GUS2 and I am 
> pretty sure that they have not been updated. Instead we went with a 
> pipeline that Steve built for DoTS which is available. The pipeline as 
> it stands need to be improved or replaced with something approaching 
> the workflow functionality so that multiple interrelated pipelines can 
> be run and tracked. I will see what can be dug up on workflow and 
> would be very interested in what you have in mind for your 
> implementation.
>
> Chris
>
> On Tuesday, October 21, 2003, at 01:54  PM, Gregory Carl Kettler wrote:
>
>> Greetings all,
>> I've been working with Terry here at the University of Chicago, and we
>> were thinking it's time to start implementing a workflow in our GUS
>> installation.  However, it looks like the modules mentioned in the
>> Workflow Technical Report (LoadWorkflowFromXML, StartWorkflow, etc.) are
>> missing from the distribution.  Were these not updated for GUS 3.0?  If
>> not, where are they and what would be involved in updating them?
>>
>>     Greg
>>
>>
>>
>>
>> -------------------------------------------------------
>> This SF.net email is sponsored by OSDN developer relations
>> Here's your chance to show off your extensive product knowledge
>> We want to know what you know. Tell us and you have a chance to win $100
>> http://www.zoomerang.com/survey.zgi?HRPT1X3RYQNC5V4MLNSV3E54
>> _______________________________________________
>> Gusdev-gusdev mailing list
>> Gus...@li...
>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>>
>
>
>
> -------------------------------------------------------
> This SF.net email is sponsored by OSDN developer relations
> Here's your chance to show off your extensive product knowledge
> We want to know what you know. Tell us and you have a chance to win $100
> http://www.zoomerang.com/survey.zgi?HRPT1X3RYQNC5V4MLNSV3E54
> _______________________________________________
> Gusdev-gusdev mailing list
> Gus...@li...
> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev