[Gusdev-gusdev] LoadGoOntology

[Chetna D. W. <ch...@ug...>]

Hi,

I am trying to:
ga GUS::GOPredict::Plugin::LoadGoOntology --usage and I am getting @INC 
error whereas when I run:
ga GUS::GOPredict::Plugin::LoadGoAssoc --usage <--- runs fine!

Following is the error:

[chetna@mango Plugin]$ ga GUS::GOPredict::Plugin::LoadGoOntology 
--usage
Reading properties from /home/gus_home/config/GUS-PluginMgr.prop

ERROR: Can't locate CBIL/Bio/GeneOntologyParser/Parser.pm in @INC (@INC 
contains: /home/gus_home/lib/perl /usr/lib/perl5/5.6.1/i386-linux 
/usr/lib/perl5/5.6.1 /usr/lib/perl5/site_perl/5.6.1/i386-linux 
/usr/lib/perl5/site_perl/5.6.1 /usr/lib/perl5/site_perl/5.6.0/i386-linux 
/usr/lib/perl5/site_perl/5.6.0 /usr/lib/perl5/site_perl 
/usr/lib/perl5/vendor_perl/5.6.1/i386-linux 
/usr/lib/perl5/vendor_perl/5.6.1 /usr/lib/perl5/vendor_perl .) at 
/home/gus_home/lib/perl/GUS/GOPredict/Plugin/LoadGoOntology.pm line 3.
BEGIN failed--compilation aborted at 
/home/gus_home/lib/perl/GUS/GOPredict/Plugin/LoadGoOntology.pm line 3.
Compilation failed in require at (eval 1) line 1.


--------------------------- STACK TRACE -------------------------
        
GUS::PluginMgr::Plugin::error('GUS::PluginMgr::GusApplication=HASH(0x80fbb0c)', 
'Can\'t locate CBIL/Bio/GeneOntologyParser/Parser.pm in @INC (@IN...') 
called at /home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 
248
        
GUS::PluginMgr::GusApplication::newFromPluginName('GUS::PluginMgr::GusApplication=HASH(0x80fbb0c)', 
'GUS::GOPredict::Plugin::LoadGoOntology') called at 
/home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 361
        
GUS::PluginMgr::GusApplication::doMajorMode_Run('GUS::PluginMgr::GusApplication=HASH(0x80fbb0c)', 
'GUS::GOPredict::Plugin::LoadGoOntology') called at 
/home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 283
        
GUS::PluginMgr::GusApplication::doMajorMode('GUS::PluginMgr::GusApplication=HASH(0x80fbb0c)', 
'GUS::GOPredict::Plugin::LoadGoOntology') called at 
/home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 192
        
GUS::PluginMgr::GusApplication::parseAndRun('GUS::PluginMgr::GusApplication=HASH(0x80fbb0c)', 
'ARRAY(0x8105130)') called at /home/gus_home/bin/ga line 11

Both LoadGoAssoc and LoadGoOntology need 
CBIL/Bio/GeneOntologyParser/Parser.pm but I am wondering why would it 
fail for one and run for other.

Thanks and hope to hear from you'll,
Chetna