[Gusdev-gusdev] Re: gusdev mailing list subscription

[Chetna W. <ch...@ar...>]

Hi Steve,

1) I downloaded latest tars from cvsweb sanger and tried to "build GUS
install -append". I remember reading about the rollback segments some
weeks back but in my case I need to comment 3 lines from 
$GUS_HOME/lib/perl/GUS/ObjRelP/ DbiDatabase.pm file.

2)  But while building:
.....
     [copy] Copying 2 files to
/home/projects/GUS/Model/src/java/org/gusdb/model/DoTS

BUILD FAILED
file:/home/projects/GUS/build.xml:123:
/home/projects/GUS/Model/src/java/org/gusdb/model/hand_edited/SRes not
found.

Because SRes is not there? Any idea I downloaded from cvsweb sanger today
morning.

Thanks for the help
Chetna

> ok, i see how i confused you.  what i described works for folks that are 
> using the cvs repository directly.
> 
> in your case, instead, you should just get the new .tar files for GUS 
> and install from
>     
>  http://cvsweb.sanger.ac.uk/cgi-bin/cvsweb.cgi/GUS/GUS.tar.gz?cvsroot=GUS&f=h&tarball=1
> and from
>     
>  http://cvsweb.sanger.ac.uk/cgi-bin/cvsweb.cgi/install/install.tar.gz?cvsroot=GUS&f=h&tarball=1
> 
> hopefully, that will fix your problem.  otherwise, let me know.
> 
> steve
> 
> Chetna Warade wrote:
> 
> >Hi,
> >
> >Thanks for the mail,
> >
> >1) I am little confused here about the rehash and updateAllProjects
> >command.
> >Where does these two commands/plugins/scripts live. I mean are they
> >located in $GUS_HOME/bin directory..
> >
> >Also currently I haven't added the cvs on the $PROJECT/install and
> >$PROJECT/GUS directories but in other repository to keep track of
> >downloads at my side. So do you recommend putting it in $PROJECT install
> >and GUS directories.
> >
> >2) I am still getting this:
> >
> >[chetna@mango chetna]$ ga +meta --commit
> >Can't locate object method "userError" via package "GUS::Plugin
> >on" (perhaps you forgot to load "GUS::PluginMgr::GusApplication
> >home/lib/perl/GUS/PluginMgr/GusApplication.pm line 44.
> >[chetna@mango chetna]$
> >
> >Hope to hear from you
> >Chetna
> >
> >  
> >
> >>$PROJECT_HOME contains the projects:  GUS, install, CBIL, etc.  GUS and 
> >>install have CVS/ dirs, but CBIL doesn't because it is from the download 
> >>site.
> >>
> >>steve
> >>
> >>Chetna Warade wrote:
> >>
> >>    
> >>
> >>>Hi,
> >>>
> >>>I tried:
> >>>[chetna@mango chetna]$ ga +meta --commit
> >>>Can't locate object method "userError" via package
> >>>"GUS::PluginMgr::GusApplication" (perhaps you forgot to load
> >>>"GUS::PluginMgr::GusApplication"?) at
> >>>/home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 44.
> >>>[chetna@mango chetna]$
> >>>
> >>>Also to run cvs update do you expect a cvs system on the $PROJECT_HOME and
> >>>$GUS_HOME directories.
> >>>
> >>>I will send a test mail on the gusdev-gusdev-list,
> >>>
> >>>Thanks,
> >>>Chetna 
> >>>
> >>> 
> >>>
> >>>      
> >>>
> >>>>i don't think there are any resitrictions on who can write to the 
> >>>>mailing list.  what address are you trying, and what happens?
> >>>>
> >>>>as far as ga is concerned, first, the command is ga +meta --commit (not 
> >>>>--create).
> >>>>
> >>>>also, i think you should just make sure you have the latest.
> >>>>
> >>>>do this:
> >>>> 1. get the latest CBIL download from: 
> >>>>http://www.cbil.upenn.edu/downloads/CBIL/releases/CBIL_v1-2-0.tar.gz
> >>>> 2. cd $PROJECT_HOME/install
> >>>>      cvs update
> >>>>      rehash
> >>>>      updateAllProjects
> >>>>
> >>>>steve
> >>>>
> >>>>Chetna Warade wrote:
> >>>>
> >>>>   
> >>>>
> >>>>        
> >>>>
> >>>>>Hi,
> >>>>>
> >>>>>I am trying to mail to the mailing list and I am unable to do so. I am
> >>>>>wondering if I have enough permissions on the mail list.
> >>>>>
> >>>>>I am tyring to run:
> >>>>>
> >>>>>[chetna@mango chetna]$ ga +meta --create
> >>>>>Can't locate object method "userError" via package
> >>>>>"GUS::PluginMgr::GusApplication" (perhaps you forgot to load
> >>>>>"GUS::PluginMgr::GusApplication"?) at
> >>>>>/home/gus_home/lib/perl/GUS/PluginMgr/GusApplication.pm line 44.
> >>>>>[chetna@mango chetna]$
> >>>>>
> >>>>>It would be great if you could help me debug this.
> >>>>>Thanks
> >>>>>Chetna 
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>
> >>>>>     
> >>>>>
> >>>>>          
> >>>>>
> >>>>   
> >>>>
> >>>>        
> >>>>
> >>> 
> >>>
> >>>      
> >>>
> >>    
> >>
> >
> >
> >  
> >
> 
>