[Gusdev-gusdev] grantPermissions.pl

[Chetna W. <ch...@ar...>]

Hi,

1) The FileNotFoundException occured because java was not able to find
build.xml located in the GUS project (point 8 in Build System set up html
page at gusdb.org). Point 8 in the Build System setup document says 
"At a minimum you need the CBIL project because GUS depends upon it..  You
may also get other CBIL projects as needed." Thats why I downloaded only
CBIL project as there were many projects and I found that confusing. In
order to solve this problem then I downloaded the GUS project from
cvsweb.sanger.ac.uk as that was the latest and GUS project at gusdb.org
was older. This solved my problem of FileNotFoundException.

- In summary the BuildSystemsetup should mention to download both CBIL and
GUS projects.

2) I tried running grantPermissions.pl (standlone with perl) and here's
the problem. The GUS project that I downloaded from cvsweb has the
directory structure: /home/projects/GUS/DBAdmin/lib/perl/*.pm

and the grantPremissions.pl has:

use GUS::DBAdmin::Database;
use GUS::DBAdmin::Schema;
 
which is why it fails. I am not quite sure if the build creates this
grantPermissions.pl but I dont know how to fix the discrepancy in the
directory structure (I could make changes though). Thats why I havent run
the create-db.sh script. Also permission of grantPermission.pl is not set
as executable. Maybe it should.

Chetna