[Gusdev-gusdev] Monthly stats S. pombe Jan

[Valerie W. <va...@sa...>]

Monthly stats (GeneDB is updated weekly)
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http://www.genedb.org/genedb/pombe/index.jsp

Number PMID supported curations for characterized genes increased from
1827 to 1940 (coverage increased from 801 to 842 genes)

S. pombe description lines increased from 16407 to 16705 (9731 types)
http://www.genedb.org/genedb/Products?organism=pombe&startLetter=a&keywords=Browse

S. pombe GO assignments decreased from 15107 to 15050 (due to an
overhaul of the configuration files to remove false assignments)

Number of manually curated S. cerevisiae (confirmed or predicted)
orthologs annotated increased from  3207 to 3223

No of orphans decreased from 486 to 483

Genes with NO biological process assignment increased from 1439 to 1460
(due to an overhaul of the configuration files to remove false
assignments)
http://www.genedb.org/genedb/pombe/GOprocess.jsp

Experimentally confirmed introns annotated increased from 748  to 775
3' UTRs annotated increased from 730 to 733
5' UTRs annotated static at 360  
These features will not be available in GeneDB until a future release,
but the datasets are available from the ftp site.
http://www.sanger.ac.uk/Projects/S_pombe/DNA_download.shtml

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Valerie Wood		       Tel: 01223 494954
S. Pombe Genome Project	       Fax: 01223 494919 		       
The Sanger Institute           email: va...@sa...
Wellcome Trust Genome Campus   http://www.sanger.ac.uk/Projects/S_pombe 
Cambridge                      
CB10 1SA