Re: [Gusdev-gusdev] GUS30 or GUSdev?

[Chris S. <sto...@sn...>]

Paul,
Will try to meet on this Monday and have an answer for our conference
call (I'm out of town today). For mid-September my guess is GUS3.0 but
that's a guess.
Cheers,
Chris

On Thu, 18 Jul 2002, pjm wrote:

> Hi all,
>
> we would like to use GUS30 schema to load data into it and, in a couple
> of weeks time, use the code for the AllGenes website to query that
> data. We are not sure how far along you are porting over the perl
> code, in particular the dbiperl_utils modules and the GA plugins -
> here are the main ones of interest;
>
>     UpdateGUSFromXML.pm (will need XML too for taxon table)
>     LoadGoOntology.pm
>     Swall & EMBL plugins
>     SO - can we use the same plugin as GO or do we need a new one?
>
> We would like to be able to show basic querying by mid-September (for
> the Woods Hole meeting) - the results can just be links to gene pages
> in www.genedb.org for now - but obviously we need to make a start very
> soon.
>
> Should we go with GUSdev or GUS30?
>
> Also the Oracle sequences are not present in Sourceforge, please could you add
> them. Our Oracle DBA has finished the PL/SQL script for exporting everything in
> the correct order, I hope to give you more details tomorrow.
>
> Paul.
>
>
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-- 
Chris Stoeckert, Ph.D.
Research Associate Professor, Dept. of Genetics
Center for Bioinformatics, University of Pennsylvania
418 Guardian Dr., Philadelphia, PA 19104
Ph: 215-573-4409   FAX:215-573-3111