From: pjm <pj...@sa...> - 2002-07-18 19:56:37
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Hi all, we would like to use GUS30 schema to load data into it and, in a couple of weeks time, use the code for the AllGenes website to query that data. We are not sure how far along you are porting over the perl code, in particular the dbiperl_utils modules and the GA plugins - here are the main ones of interest; UpdateGUSFromXML.pm (will need XML too for taxon table) LoadGoOntology.pm Swall & EMBL plugins SO - can we use the same plugin as GO or do we need a new one? We would like to be able to show basic querying by mid-September (for the Woods Hole meeting) - the results can just be links to gene pages in www.genedb.org for now - but obviously we need to make a start very soon. Should we go with GUSdev or GUS30? Also the Oracle sequences are not present in Sourceforge, please could you add them. Our Oracle DBA has finished the PL/SQL script for exporting everything in the correct order, I hope to give you more details tomorrow. Paul. |