Re: [Gusdev-rad-issues] Error loading data using ArrayResultLoader

[Junmin L. <ju...@pc...>]

Hi, Sucheta,
Looks like the plugin didn't read the header line correctly. The problem 
can be due to either the wrong format of the file or bug in the plugin.
  Can you send me the data file?

--junmin


On Mon, 15 Nov 2004, Elisabetta Manduchi wrote:

>
> Hi Sucheta,
> I'm cc-ing Junmin on this, since he wrote the plugin, so he should be able to 
> pin down the problem.
> Elisabetta
>
>
> ---
>
> On Mon, 15 Nov 2004, Sucheta Tripathy wrote:
>
>> 
>> 
>> Hi Elissabetta,
>> 
>> I am trying to upload data using the ArrayResultLoader plugin and
>> following are my command line parameters
>> 
>> ga GUS::RAD::Plugin::ArrayResultLoader --data_file <path> --array_id 3
>> --e_subclass_view ShortOligo --c_subclass_view ShortOligoFamily
>> --quantification_id 3 --er_subclass_view AffymetrixCEL --cr_subclass_view
>> AffymetrixMAS5 --debug --commit >& result_loader.err
>> 
>> 
>> And my data file has the following heeader:
>> 
>> x_position y_position mean stdv name detection signal detection_p_value
>> data        data       data  data  data  data   data   data
>> 
>> All separated by tab.
>> 
>> But I get an error like this:
>> 
>> Missing header x_position which is required to upload data into file.
>> 
>> Although I have the x_position defined in the header.
>> 
>> Am doing something wrong here. I have all the pre-requisites done.
>> 
>> Thanks
>> 
>> Sucheta
>