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From: Adhemar <az...@gm...> - 2011-05-09 14:03:20
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[adhemar@bagre schistodb30]$ build GUS install -append -installDBSchema
Buildfile: /projects/schistodb30/project_home/install/build.xml
install:
[echo] proj=GUS
[echo] comp=
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/Bio
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/bin
[copy] Copying 8 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/Bio
[copy] Copying 95 files to /projects/schistodb30/gus_home/lib/perl/CBIL/Bio
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/test/CBIL/Bio
[copy] Copying 4 files to /projects/schistodb30/gus_home/test/CBIL/Bio
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/data/CBIL/Bio
[copy] Copying 9 files to /projects/schistodb30/gus_home/data/CBIL/Bio
recordBuildState:
[propertyfile] Creating new property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/CSP
componentPartCopySub:
[copy] Copying 1 file to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/CSP
[copy] Copying 11 files to /projects/schistodb30/gus_home/lib/perl/CBIL/CSP
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/java
[copy] Copying 2 files to /projects/schistodb30/gus_home/lib/java
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/CBIL/CSP
[copy] Copying 10 files to /projects/schistodb30/gus_home/doc/CBIL/CSP
defaultJavaCompile:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/java/db_driver
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/java/not-deployed
[jar] Building jar: /projects/schistodb30/gus_home/lib/java/CBIL-CSP.jar
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/Util
componentPartCopySub:
[copy] Copying 11 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/Util
[copy] Copying 17 files to /projects/schistodb30/gus_home/lib/perl/CBIL/Util
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/CBIL/Util
[copy] Copying 1 file to /projects/schistodb30/gus_home/doc/CBIL/Util
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/Cider
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/Cider
[copy] Copying 12 files to /projects/schistodb30/gus_home/lib/perl/CBIL/Cider
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/HQ
componentPartCopySub:
[copy] Copying 1 file to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/HQ
[copy] Copying 4 files to /projects/schistodb30/gus_home/lib/perl/CBIL/HQ
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/TranscriptExpression
componentPartCopySub:
[copy] Copying 4 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/xml
[copy] Copying 3 files to /projects/schistodb30/gus_home/lib/xml
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/TranscriptExpression
[copy] Copying 18 files to /projects/schistodb30/gus_home/lib/perl/CBIL/TranscriptExpression
[copy] Copied 4 empty directories to 1 empty directory under /projects/schistodb30/gus_home/lib/perl/CBIL/TranscriptExpression
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/R/TranscriptExpression
[copy] Copying 2 files to /projects/schistodb30/gus_home/lib/R/TranscriptExpression
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing CBIL/ObjectMapper
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/CBIL/ObjectMapper
[copy] Copying 7 files to /projects/schistodb30/gus_home/lib/perl/CBIL/ObjectMapper
componentPartCopySub:
[copy] Copying 1 file to /projects/schistodb30/gus_home/config
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/CBIL/ObjectMapper
[copy] Copying 1 file to /projects/schistodb30/gus_home/doc/CBIL/ObjectMapper
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing GUS/Supported
componentPartCopySub:
[copy] Copying 7 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/Supported
[copy] Copying 7 files to /projects/schistodb30/gus_home/lib/perl/GUS/Supported
componentPartCopySub:
[copy] Copying 16 files to /projects/schistodb30/gus_home/lib/java
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/Supported/Plugin
[copy] Copying 40 files to /projects/schistodb30/gus_home/lib/perl/GUS/Supported/Plugin
componentPartCopySub:
[copy] Copying 3 files to /projects/schistodb30/gus_home/config
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/GUS/Supported
[copy] Copying 5 files to /projects/schistodb30/gus_home/doc/GUS/Supported
defaultJavaCompile:
[jar] Building jar: /projects/schistodb30/gus_home/lib/java/GUS-Supported.jar
svnInfo:
[exec] Result: 1
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing GUS/Community
componentPartCopySub:
[copy] Copying 11 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/sql
[copy] Copying 1 file to /projects/schistodb30/gus_home/lib/sql
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/Community
[copy] Copying 28 files to /projects/schistodb30/gus_home/lib/perl/GUS/Community
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/Community/Plugin
[copy] Copying 84 files to /projects/schistodb30/gus_home/lib/perl/GUS/Community/Plugin
componentPartCopySub:
[copy] Copying 11 files to /projects/schistodb30/gus_home/config
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/GUS/Community
[copy] Copying 8 files to /projects/schistodb30/gus_home/doc/GUS/Community
svnInfo:
[exec] Result: 1
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing GUS/DBAdmin
componentPartCopySub:
[copy] Copying 11 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/DBAdmin
[copy] Copying 7 files to /projects/schistodb30/gus_home/lib/perl/GUS/DBAdmin
componentPartCopySub:
[copy] Copying 5 files to /projects/schistodb30/gus_home/lib/java
defaultJavaCompile:
[jar] Building jar: /projects/schistodb30/gus_home/lib/java/GUS-DBAdmin.jar
svnInfo:
[exec] Result: 1
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
copyLocal14Driver:
[echo] Installing local ojdbc14.jar from /oracle/app/oracle/jdbc/lib/ojdbc14.jar
[copy] Copying 1 file to /projects/schistodb30/gus_home/lib/java/db_driver
copyLocal5Driver:
[echo] Installing local ojdbc5.jar from /oracle/app/oracle/jdbc/lib/ojdbc5.ja
[echo] r
[copy] Copying 1 file to /projects/schistodb30/gus_home/lib/java/db_driver
defaultComponentInstall:
[echo] .
[echo] Installing GUS/GOPredict
componentPartCopySub:
[copy] Copying 3 files to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/GOPredict
[copy] Copying 20 files to /projects/schistodb30/gus_home/lib/perl/GUS/GOPredict
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/lib/perl/GUS/GOPredict/Plugin
[copy] Copying 9 files to /projects/schistodb30/gus_home/lib/perl/GUS/GOPredict/Plugin
componentPartCopySub:
[mkdir] Created dir: /projects/schistodb30/gus_home/doc/GUS/GOPredict
[copy] Copying 1 file to /projects/schistodb30/gus_home/doc/GUS/GOPredict
defaultJavaCompile:
[jar] Building jar: /projects/schistodb30/gus_home/lib/java/GUS-GOPredict.jar
svnInfo:
[exec] Result: 1
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing GusSchema/Definition
componentPartCopySub:
[copy] Copying 1 file to /projects/schistodb30/gus_home/bin
componentPartCopySub:
[copy] Copying 4 files to /projects/schistodb30/gus_home/config
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
defaultComponentInstall:
[echo] .
[echo] Installing GUS/DBAdmin
svnInfo:
[exec] Result: 1
recordBuildState:
[propertyfile] Updating property file: /projects/schistodb30/gus_home/config/.build.info
copyLocal14Driver:
[echo] Installing local ojdbc14.jar from /oracle/app/oracle/jdbc/lib/ojdbc14.jar
[copy] Copying 1 file to /projects/schistodb30/gus_home/lib/java/db_driver
copyLocal5Driver:
[echo] Installing local ojdbc5.jar from /oracle/app/oracle/jdbc/lib/ojdbc5.ja
[echo] r
[copy] Copying 1 file to /projects/schistodb30/gus_home/lib/java/db_driver
InstallSchema:
[InstallSchema] INFO [main] (InstallSchemaTask.java:73) - Reading database from /projects/schistodb30/project_home/GusSchema/Definition/config/gus_schema.xml
BUILD FAILED
/projects/schistodb30/project_home/install/build.xml:37: The following error occurred while executing this line:
/projects/schistodb30/project_home/GUS/build.xml:16: The following error occurred while executing this line:
/projects/schistodb30/project_home/GusSchema/build.xml:62: java.lang.IllegalArgumentException: No enum const class org.gusdb.dbadmin.model.Column$ColumnType.Date
Total time: 2 seconds
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From: Mark H. <mh...@ug...> - 2011-05-09 15:13:04
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We use the ant-1.6.5 package for CentOS . You also have to install the ant-nodeps package to provide tools.jar. I doubt the ant version is the cause of your attached error. -M Mark Heiges EuPathDB Bioinformatics Resource Center Center for Tropical and Emerging Global Diseases Paul D. Coverdell Center, Rm 370 500 D. W. Brooks Drive University of Georgia, Athens, GA 30602 On May 9, 2011, at 10:03 AM, Adhemar wrote: > Hi, > We're having problems during the schema installation and we're not > able to figure out what might be happening. > > I guess it might be related to the versions of GUS dependencies. > For instance, CentOS v5 comes with ant 1.6.5, which does not work > for GUS. > There are some warnings if one tries the latest (1.8.2), but it > works fine with the version 1.7.1 > > The error dump is attached and here is the documentation of what we > ran up to now: > http://writer.zoho.com/public/azneto/schistodb-documentation > > Thanks, > Adhemar > > > > < > dump > .txt > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev |
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From: Steve F. <sfi...@pc...> - 2011-05-09 15:21:14
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this looks like a compile error in a file in the schema installer, not to do with ant. probably to do with java version. we'll look into it. steve On 5/9/2011 11:12 AM, Mark Heiges wrote: > We use the ant-1.6.5 package for CentOS . You also have to install the > ant-nodeps package to provide tools.jar. > > I doubt the ant version is the cause of your attached error. > > -M > > Mark Heiges > EuPathDB Bioinformatics Resource Center > Center for Tropical and Emerging Global Diseases > Paul D. Coverdell Center, Rm 370 > 500 D. W. Brooks Drive > University of Georgia, Athens, GA 30602 > > On May 9, 2011, at 10:03 AM, Adhemar wrote: > >> Hi, >> We're having problems during the schema installation and we're not >> able to figure out what might be happening. >> >> I guess it might be related to the versions of GUS dependencies. >> For instance, CentOS v5 comes with ant 1.6.5, which does not work >> for GUS. >> There are some warnings if one tries the latest (1.8.2), but it >> works fine with the version 1.7.1 >> >> The error dump is attached and here is the documentation of what we >> ran up to now: >> http://writer.zoho.com/public/azneto/schistodb-documentation >> >> Thanks, >> Adhemar >> >> >> >> < >> dump >> .txt >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >> Gusdev-gusdev mailing list >> Gus...@li... >> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > > > > > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd > _______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev |
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From: Adhemar <az...@gm...> - 2011-05-09 15:26:35
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You're right. The problem might not be related to dependencies versions. I've just changed it back to ant-1.6.5 and it's seems to be working fine. Probably the ant-nodpes wasn't installed before. But we are still stuck with that same error message: BUILD FAILED /projects/schistodb30/project_home/install/build.xml:37: The following error occurred while executing this line: /projects/schistodb30/project_home/GUS/build.xml:16: The following error occurred while executing this line: /projects/schistodb30/project_home/GusSchema/build.xml:62: java.lang.IllegalArgumentException: No enum const class org.gusdb.dbadmin.model.Column$ColumnType.Date Thanks, -Adhemar 2011/5/9 Mark Heiges <mh...@ug...> > We use the ant-1.6.5 package for CentOS . You also have to install the > ant-nodeps package to provide tools.jar. > > I doubt the ant version is the cause of your attached error. > > -M > > Mark Heiges > EuPathDB Bioinformatics Resource Center > Center for Tropical and Emerging Global Diseases > Paul D. Coverdell Center, Rm 370 > 500 D. W. Brooks Drive > University of Georgia, Athens, GA 30602 > > > On May 9, 2011, at 10:03 AM, Adhemar wrote: > > Hi, >> We're having problems during the schema installation and we're not able to >> figure out what might be happening. >> >> I guess it might be related to the versions of GUS dependencies. >> For instance, CentOS v5 comes with ant 1.6.5, which does not work for GUS. >> There are some warnings if one tries the latest (1.8.2), but it works fine >> with the version 1.7.1 >> >> The error dump is attached and here is the documentation of what we ran up >> to now: >> http://writer.zoho.com/public/azneto/schistodb-documentation >> >> Thanks, >> Adhemar >> >> >> >> >> <dump.txt>------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> >> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >> Gusdev-gusdev mailing list >> Gus...@li... >> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >> > > > > > > > > > |
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From: Steve F. <sfi...@pc...> - 2011-05-09 17:06:35
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Adhemar, i forwarded this to our colleague jerric and he figured out that the problem is that the db instance seems to be telling jdbc that the type "DATE" is "Date." we have to look further into it. steve On 5/9/2011 11:26 AM, Adhemar wrote: > You're right. The problem might not be related to dependencies versions. > I've just changed it back to ant-1.6.5 and it's seems to be working fine. > Probably the ant-nodpes wasn't installed before. > > But we are still stuck with that same error message: > > BUILD FAILED > /projects/schistodb30/project_home/install/build.xml:37: The following > error occurred while executing this line: > /projects/schistodb30/project_home/GUS/build.xml:16: The following > error occurred while executing this line: > /projects/schistodb30/project_home/GusSchema/build.xml:62: > java.lang.IllegalArgumentException: No enum const class > org.gusdb.dbadmin.model.Column$ColumnType.Date > > > Thanks, > -Adhemar > > > > 2011/5/9 Mark Heiges <mh...@ug... <mailto:mh...@ug...>> > > We use the ant-1.6.5 package for CentOS . You also have to install > the ant-nodeps package to provide tools.jar. > > I doubt the ant version is the cause of your attached error. > > -M > > Mark Heiges > EuPathDB Bioinformatics Resource Center > Center for Tropical and Emerging Global Diseases > Paul D. Coverdell Center, Rm 370 > 500 D. W. Brooks Drive > University of Georgia, Athens, GA 30602 > > > On May 9, 2011, at 10:03 AM, Adhemar wrote: > > Hi, > We're having problems during the schema installation and we're > not able to figure out what might be happening. > > I guess it might be related to the versions of GUS dependencies. > For instance, CentOS v5 comes with ant 1.6.5, which does not > work for GUS. > There are some warnings if one tries the latest (1.8.2), but > it works fine with the version 1.7.1 > > The error dump is attached and here is the documentation of > what we ran up to now: > http://writer.zoho.com/public/azneto/schistodb-documentation > > Thanks, > Adhemar > > > > <dump.txt>------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > <mailto:Gus...@li...> > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > > > > > > > > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd > > > _______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev |
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From: Mark H. <mh...@ug...> - 2011-05-09 19:02:27
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You have an outdated gus.config file which has lowercased hkspec column types. For example, hkspec.MODIFICATION_DATE=Date,0,0,false instead of the correct hkspec.MODIFICATION_DATE=DATE,0,0,false Start with a new gus.config from $PROJECT_HOME/install/gus.config.sample On May 9, 2011, at 11:26 AM, Adhemar wrote: > You're right. The problem might not be related to dependencies > versions. > I've just changed it back to ant-1.6.5 and it's seems to be working > fine. > Probably the ant-nodpes wasn't installed before. > > But we are still stuck with that same error message: > > BUILD FAILED > /projects/schistodb30/project_home/install/build.xml:37: The > following error occurred while executing this line: > /projects/schistodb30/project_home/GUS/build.xml:16: The following > error occurred while executing this line: > /projects/schistodb30/project_home/GusSchema/build.xml:62: > java.lang.IllegalArgumentException: No enum const class > org.gusdb.dbadmin.model.Column$ColumnType.Date > > > Thanks, > -Adhemar > > > > 2011/5/9 Mark Heiges <mh...@ug...> > We use the ant-1.6.5 package for CentOS . You also have to install > the ant-nodeps package to provide tools.jar. > > I doubt the ant version is the cause of your attached error. > > -M > > Mark Heiges > EuPathDB Bioinformatics Resource Center > Center for Tropical and Emerging Global Diseases > Paul D. Coverdell Center, Rm 370 > 500 D. W. Brooks Drive > University of Georgia, Athens, GA 30602 > > > On May 9, 2011, at 10:03 AM, Adhemar wrote: > > Hi, > We're having problems during the schema installation and we're not > able to figure out what might be happening. > > I guess it might be related to the versions of GUS dependencies. > For instance, CentOS v5 comes with ant 1.6.5, which does not work > for GUS. > There are some warnings if one tries the latest (1.8.2), but it > works fine with the version 1.7.1 > > The error dump is attached and here is the documentation of what we > ran up to now: > http://writer.zoho.com/public/azneto/schistodb-documentation > > Thanks, > Adhemar > > > > < > dump > .txt > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > > > > > > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev |
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From: Steve F. <sfi...@pc...> - 2011-05-09 19:11:17
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too bad that we have this stuff in gus.config. seems like unneeded configuration, as i can't think of a situation where it would be ok to vary this. adhemar, is this hkspec documented anywhere that you have seen? steve On 5/9/2011 3:00 PM, Mark Heiges wrote: > You have an outdated gus.config file which has lowercased hkspec > column types. For example, > hkspec.MODIFICATION_DATE=Date,0,0,false > instead of the correct > hkspec.MODIFICATION_DATE=DATE,0,0,false > > Start with a new gus.config from $PROJECT_HOME/install/gus.config.sample > > > On May 9, 2011, at 11:26 AM, Adhemar wrote: > >> You're right. The problem might not be related to dependencies >> versions. >> I've just changed it back to ant-1.6.5 and it's seems to be working >> fine. >> Probably the ant-nodpes wasn't installed before. >> >> But we are still stuck with that same error message: >> >> BUILD FAILED >> /projects/schistodb30/project_home/install/build.xml:37: The >> following error occurred while executing this line: >> /projects/schistodb30/project_home/GUS/build.xml:16: The following >> error occurred while executing this line: >> /projects/schistodb30/project_home/GusSchema/build.xml:62: >> java.lang.IllegalArgumentException: No enum const class >> org.gusdb.dbadmin.model.Column$ColumnType.Date >> >> >> Thanks, >> -Adhemar >> >> >> >> 2011/5/9 Mark Heiges<mh...@ug...> >> We use the ant-1.6.5 package for CentOS . You also have to install >> the ant-nodeps package to provide tools.jar. >> >> I doubt the ant version is the cause of your attached error. >> >> -M >> >> Mark Heiges >> EuPathDB Bioinformatics Resource Center >> Center for Tropical and Emerging Global Diseases >> Paul D. Coverdell Center, Rm 370 >> 500 D. W. Brooks Drive >> University of Georgia, Athens, GA 30602 >> >> >> On May 9, 2011, at 10:03 AM, Adhemar wrote: >> >> Hi, >> We're having problems during the schema installation and we're not >> able to figure out what might be happening. >> >> I guess it might be related to the versions of GUS dependencies. >> For instance, CentOS v5 comes with ant 1.6.5, which does not work >> for GUS. >> There are some warnings if one tries the latest (1.8.2), but it >> works fine with the version 1.7.1 >> >> The error dump is attached and here is the documentation of what we >> ran up to now: >> http://writer.zoho.com/public/azneto/schistodb-documentation >> >> Thanks, >> Adhemar >> >> >> >> < >> dump >> .txt >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >> Gusdev-gusdev mailing list >> Gus...@li... >> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >> >> >> >> >> >> >> >> >> >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >> Gusdev-gusdev mailing list >> Gus...@li... >> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev > > > ------------------------------------------------------------------------------ > WhatsUp Gold - Download Free Network Management Software > The most intuitive, comprehensive, and cost-effective network > management toolset available today. Delivers lowest initial > acquisition cost and overall TCO of any competing solution. > http://p.sf.net/sfu/whatsupgold-sd > _______________________________________________ > Gusdev-gusdev mailing list > Gus...@li... > https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev |
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From: Adhemar <az...@gm...> - 2011-05-09 20:15:33
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I've just updated to the newest gus.config version as Mark told and it worked fine. Thank you! -Adhemar 2011/5/9 Steve Fischer <sfi...@pc...> > too bad that we have this stuff in gus.config. seems like unneeded > configuration, as i can't think of a situation where it would be ok to vary > this. > > adhemar, is this hkspec documented anywhere that you have seen? > > steve > > > On 5/9/2011 3:00 PM, Mark Heiges wrote: > >> You have an outdated gus.config file which has lowercased hkspec >> column types. For example, >> hkspec.MODIFICATION_DATE=Date,0,0,false >> instead of the correct >> hkspec.MODIFICATION_DATE=DATE,0,0,false >> >> Start with a new gus.config from $PROJECT_HOME/install/gus.config.sample >> >> >> On May 9, 2011, at 11:26 AM, Adhemar wrote: >> >> You're right. The problem might not be related to dependencies >>> versions. >>> I've just changed it back to ant-1.6.5 and it's seems to be working >>> fine. >>> Probably the ant-nodpes wasn't installed before. >>> >>> But we are still stuck with that same error message: >>> >>> BUILD FAILED >>> /projects/schistodb30/project_home/install/build.xml:37: The >>> following error occurred while executing this line: >>> /projects/schistodb30/project_home/GUS/build.xml:16: The following >>> error occurred while executing this line: >>> /projects/schistodb30/project_home/GusSchema/build.xml:62: >>> java.lang.IllegalArgumentException: No enum const class >>> org.gusdb.dbadmin.model.Column$ColumnType.Date >>> >>> >>> Thanks, >>> -Adhemar >>> >>> >>> >>> 2011/5/9 Mark Heiges<mh...@ug...> >>> We use the ant-1.6.5 package for CentOS . You also have to install >>> the ant-nodeps package to provide tools.jar. >>> >>> I doubt the ant version is the cause of your attached error. >>> >>> -M >>> >>> Mark Heiges >>> EuPathDB Bioinformatics Resource Center >>> Center for Tropical and Emerging Global Diseases >>> Paul D. Coverdell Center, Rm 370 >>> 500 D. W. Brooks Drive >>> University of Georgia, Athens, GA 30602 >>> >>> >>> On May 9, 2011, at 10:03 AM, Adhemar wrote: >>> >>> Hi, >>> We're having problems during the schema installation and we're not >>> able to figure out what might be happening. >>> >>> I guess it might be related to the versions of GUS dependencies. >>> For instance, CentOS v5 comes with ant 1.6.5, which does not work >>> for GUS. >>> There are some warnings if one tries the latest (1.8.2), but it >>> works fine with the version 1.7.1 >>> >>> The error dump is attached and here is the documentation of what we >>> ran up to now: >>> http://writer.zoho.com/public/azneto/schistodb-documentation >>> >>> Thanks, >>> Adhemar >>> >>> >>> >>> < >>> dump >>> .txt >>> >>> ------------------------------------------------------------------------------ >>> WhatsUp Gold - Download Free Network Management Software >>> The most intuitive, comprehensive, and cost-effective network >>> management toolset available today. Delivers lowest initial >>> acquisition cost and overall TCO of any competing solution. >>> >>> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >>> Gusdev-gusdev mailing list >>> Gus...@li... >>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >>> >>> >>> >>> >>> >>> >>> >>> >>> >>> >>> ------------------------------------------------------------------------------ >>> WhatsUp Gold - Download Free Network Management Software >>> The most intuitive, comprehensive, and cost-effective network >>> management toolset available today. Delivers lowest initial >>> acquisition cost and overall TCO of any competing solution. >>> >>> http://p.sf.net/sfu/whatsupgold-sd_______________________________________________ >>> Gusdev-gusdev mailing list >>> Gus...@li... >>> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >>> >> >> >> >> ------------------------------------------------------------------------------ >> WhatsUp Gold - Download Free Network Management Software >> The most intuitive, comprehensive, and cost-effective network >> management toolset available today. Delivers lowest initial >> acquisition cost and overall TCO of any competing solution. >> http://p.sf.net/sfu/whatsupgold-sd >> _______________________________________________ >> Gusdev-gusdev mailing list >> Gus...@li... >> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev >> > |
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