gusdev-gusdev

[Gusdev-gusdev] wdk installconfig

[Fidel S. <fi...@vb...>]

I am trying to install the WDK.  I have a question wrt the
InstallConfig.pm file, which is used to configure each servlet.

The variable $InstallConfig::CONFIG uses a hash with some params.
Would someone elaborate on what PROJECT_ID, SHOW_PRIVATE_SEQS, and
PRIVATE_SEQ_DB_IDS (see below for $InstallConfig::CONFIG example) are
supposed to be for?  I assume that PROJECT_ID comes from
core.projectinfo.

Thanks 

Fidel


'dotsgenes'=> {
               ...
               params {
                       ...
                       PROJECT_ID => 839,                        # AllGenes-6.0
                       SHOW_PRIVATE_SEQS => 0,
                       PRIVATE_SEQ_DB_IDS => '(178,3392,3892)',
                       ....

Re: [Gusdev-gusdev] wdk installconfig

[Steve F. <sfi...@pc...>]

In general, the things in that file are values that are substituted into 
the WDK code.  

PROJECT_ID: some queries are constrained by project_id.   Eg, find all 
na_sequences that are from a given project.   If you don't plan on using 
this i think you can ignore this property

SHOW_PRIVATE_IDS and PRIVATE_SEQ_DB_IDS has to do with storing sequences 
that are proprietary.   I woudld set the first to true and ignore the 
second.

steve

Fidel Salas wrote:

>I am trying to install the WDK.  I have a question wrt the
>InstallConfig.pm file, which is used to configure each servlet.
>
>The variable $InstallConfig::CONFIG uses a hash with some params.
>Would someone elaborate on what PROJECT_ID, SHOW_PRIVATE_SEQS, and
>PRIVATE_SEQ_DB_IDS (see below for $InstallConfig::CONFIG example) are
>supposed to be for?  I assume that PROJECT_ID comes from
>core.projectinfo.
>
>Thanks 
>
>Fidel
>
>
>'dotsgenes'=> {
>               ...
>               params {
>                       ...
>                       PROJECT_ID => 839,                        # AllGenes-6.0
>                       SHOW_PRIVATE_SEQS => 0,
>                       PRIVATE_SEQ_DB_IDS => '(178,3392,3892)',
>                       ....
>
>
>
>
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>  
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Re: [Gusdev-gusdev] wdk installconfig

[MICHAEL L. <lu...@cs...>]

Hello-
I'm trying to work the WDK install myself.  When trying to compile the
java files by installServlet.pl, I'm having an error trying to find a
class:
RadioTableParam

Any idea where this class would be?  A google search on it yielded no
results.  I found it not in the CBIL releases 1.1,1.2,and1.3 which are
availble from the CVS server.  I would assume that it should be in
cbil.csp.dialog
Does anyone have this class, or installed the wdk from the tarball and
encountered this problem?

Michael Luchtan
http://www.cs.uga.edu/~luchtan

Please disregard--Re: [Gusdev-gusdev] wdk installconfig

[MICHAEL L. <lu...@cs...>]

Hello All
Please disregard my previous message.  I solved the problem by placing the
jar files in the CORRECT location.  JDKHOME/jre/lib/ext/ instead of
manipulating my CLASS_PATH for each one.

Michael Luchtan
http://www.cs.uga.edu/~luchtan


On Thu, 22 Jan 2004, MICHAEL LUCHTAN wrote:

> Hello-
> I'm trying to work the WDK install myself.  When trying to compile the
> java files by installServlet.pl, I'm having an error trying to find a
> class:
> RadioTableParam
>
> Any idea where this class would be?  A google search on it yielded no
> results.  I found it not in the CBIL releases 1.1,1.2,and1.3 which are
> availble from the CVS server.  I would assume that it should be in
> cbil.csp.dialog
> Does anyone have this class, or installed the wdk from the tarball and
> encountered this problem?
>
> Michael Luchtan
> http://www.cs.uga.edu/~luchtan
>
>
>
>
>
> -------------------------------------------------------
> The SF.Net email is sponsored by EclipseCon 2004
> Premiere Conference on Open Tools Development and Integration
> See the breadth of Eclipse activity. February 3-5 in Anaheim, CA.
> http://www.eclipsecon.org/osdn
> _______________________________________________
> Gusdev-gusdev mailing list
> Gus...@li...
> https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>

Re: [Gusdev-gusdev] wdk installconfig

[Steve F. <st...@pc...>]

its probably in a slightly later vesion of the CBIL releases.  i'll look 
around.

steve

MICHAEL LUCHTAN wrote:

>Hello-
>I'm trying to work the WDK install myself.  When trying to compile the
>java files by installServlet.pl, I'm having an error trying to find a
>class:
>RadioTableParam
>
>Any idea where this class would be?  A google search on it yielded no
>results.  I found it not in the CBIL releases 1.1,1.2,and1.3 which are
>availble from the CVS server.  I would assume that it should be in
>cbil.csp.dialog
>Does anyone have this class, or installed the wdk from the tarball and
>encountered this problem?
>
>Michael Luchtan
>http://www.cs.uga.edu/~luchtan
>
>
>
>
>
>-------------------------------------------------------
>The SF.Net email is sponsored by EclipseCon 2004
>Premiere Conference on Open Tools Development and Integration
>See the breadth of Eclipse activity. February 3-5 in Anaheim, CA.
>http://www.eclipsecon.org/osdn
>_______________________________________________
>Gusdev-gusdev mailing list
>Gus...@li...
>https://lists.sourceforge.net/lists/listinfo/gusdev-gusdev
>  
>

[Gusdev-gusdev] Core::WorkflowNode missing?

[Dave B. <db...@pc...>]

We seem to be missing the table Core::WorkflowNode.  It should exist as 
the 'superclass view' of the implementation table Core::WorkflowNodeImp, 
which is the case with all the other implementation tables.

Is this correct?  Right now it is giving the java object generator 
some problems.  I can add it as a schema change request if there is no 
reason for it not to be there.

thanks,
dave