gusdev-gusdev

[Gusdev-gusdev] GBParser observation

[Chetna D. W. <ch...@ug...>]

Hey all,

I observed one thing about GBParser and would love to know why this 
happens. We had 28221 records in the GenBank file. When run with 
GBParser it tries to look for 28222nd record and gives an error "Cant 
find getAccession() ...." and then gives status that 28221 updated and 
one failed and exits anyways.

Hope to hear from you all,
Chetna

Re: [Gusdev-gusdev] GBParser observation

[Steve F. <st...@pc...>]

chetna-

take a look at the tail of the file.  maybe there is some junk there.

steve

Chetna D. Warade wrote:

>Hey all,
>
>I observed one thing about GBParser and would love to know why this 
>happens. We had 28221 records in the GenBank file. When run with 
>GBParser it tries to look for 28222nd record and gives an error "Cant 
>find getAccession() ...." and then gives status that 28221 updated and 
>one failed and exits anyways.
>
>Hope to hear from you all,
>Chetna
>
>
>
>
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