#19 CMap 1.01 Optional Template Toolkit Config

[Ben Faga]

NOTE: This patch adds obscure functionality to CMap. It is not needed for normal use of CMap.

This patch adds a configuration option that can set flags during the creation
of the Template Toolkit object. This allows for more powerful use of Template
Toolkit. The flags are passed into the Template->new() method.

The following is an example of how to use this new configuration option. It
will only take strings as values (no complicated objects).

<template_toolkit_flags>
EVAL_PERL 1
SOMETHING else
</template_toolkit_flags>

These patches will work for CMap version 1.01.

Apply these patches to the CMap.pm perl module and the cmap_validate_config.pl script.

$ patch /path/to/Bio/GMOD/CMap.pm CMap.080924.v1.01.patch
$ patch /path/to/bin/cmap_validate_config.pl cmap_validate_config.080924.v1.01.patch

[Ben Faga]

CMap 1.01 Optional Template Toolkit Flags