[Gmod-schema] functions that should be optional that I don't know about

[Scott C. <ca...@cs...>]

Hello,

At the moment, when someone does `perl Makefile.PL` to install chado,
the user is presented with a list of 4 functions that he can optionally
install (listed in modules/function.modules):

sequence/gff-bridge/sequence-gff-funcs.pgsql
sequence/functions/feature_subalignments.plpgsql
sequence/functions/get_sub_feature_ids.plpgsql
sequence/apollo-bridge/apollo-triggers.sql

I suspect that there are other functions (written mostly by folks at
Harvard_ that I don't know anything about, but would probably be
generally useful.  Am I right?  What other functions in schema/chado
should be optionally installed?

A related question is what should be in the default database schema.  At
the moment, the first three in the list above are included in the
default schema, if there are more added to the optional list, which
among those should be put in the default?

Thanks,
Scott
 
-- 
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Scott Cain, Ph. D.                                         ca...@cs...
GMOD Coordinator (http://www.gmod.org/)                     216-392-3087
Cold Spring Harbor Laboratory