Re: [Gmod-ajax] JBrowse2 multi-quantitative tracks

[Ke J. <bio...@gm...>]

Thanks! This is really really helpful! Especially the part that takes the
config JSON block from the UI. This is a great trick!

Thanks!

Ke

On Fri, Jun 2, 2023 at 5:50 PM Colin <col...@gm...> wrote:

> Hi there,
> It's great to hear that MultiBigWig is working for you!
>
> It can be tricky to get some of the precise configs, but one way is to go
> into the configuration editor specifically and then tweak the settings. The
> below config shows that you can set defaultRendering on the "display" to
> enable this.
>
> I also attached to this email some screenshots showing the procedure I use
> to get the right config options
>
> { "type": "MultiQuantitativeTrack", "trackId": "mytrack", "name":
> "MultiBigWig track", "assemblyNames": ["volvox"], "adapter": { "type":
> "MultiWiggleAdapter", "subadapters": [ { "name": "row1", "type":
> "BigWigAdapter", "bigWigLocation": { "uri": "v1.bw" } }, { "name":
> "row2", "type": "BigWigAdapter", "bigWigLocation": {"uri": "v2.bw" } } ]
> }, "displays": [ { "type": "MultiLinearWiggleDisplay", "displayId":
> "mydisplayid-randomnumber-41543514", "defaultRendering": "multirowdensity"
> } ] }
>
>
>
>
> -Colin
>
> On Fri, Jun 2, 2023 at 1:30 PM Ke Jiang <bio...@gm...> wrote:
>
>> Hi,
>>
>> I've been using this track type very extensively and it looks great! One
>> small question: in the configuration, is there a way to set the default
>> render type to multirowdensity (for certain data types, density is
>> preferred over xyplot)? I guess it might be a tag/value pair in the JSON
>> block but it seems I can't find the exact syntax for this.
>>
>> Thanks!
>>
>> Ke
>>
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