From: Flora U. <flo...@un...> - 2022-08-19 10:55:03
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Dear GMOD Team, I am trying to parse my maker-derived GFF to jbrowse with maker2jbrowse, but keep running into the below issue. ./maker2jbrowse ~/annotation-workdir/maker-rounds/rnd2_v2.summary.gff > Can't exec "prepare-refseqs.pl": No such file or directory at > ./maker2jbrowse line 280. > prepare-refseqs.pl failed with exit status -1 at ./maker2jbrowse line 280. > I managed to run prepare-refseqs.pl on its own succesfully. Can you advise a way around this error? The version I am using is JBrowse-1.16.11, downloaded as a zipfile from https://jbrowse.org/blog/ I just unzipped and tried using the maker2jbrowse script in the /bin directory. I tried both with the minified release and the dev version. My best, Flora |