Re: [Gmod-ajax] Trouble installing JBrowse 1 on new webserver

[Hans Vasquez-G. <hva...@un...>]

Thank you Colin.  Uninstalling Node 17.x and installing 14.x fixed the setup problem.

Bests,
-Hans
________________________________
From: Colin <col...@gm...>
Sent: Wednesday, March 16, 2022 8:05 PM
To: Hans Vasquez-Gross <hva...@un...>
Cc: gmo...@li... <gmo...@li...>
Subject: Re: [Gmod-ajax] Trouble installing JBrowse 1 on new webserver

Hi there,
You may need node version 14 or less. More recent versions have an issue with the node-sass module

See readme
https://github.com/gmod/jbrowse#readme<https://nam04.safelinks.protection.outlook.com/?url=https%3A%2F%2Fgithub.com%2Fgmod%2Fjbrowse%23readme&data=04%7C01%7Chvasquezgross%40unr.edu%7C0e9863c0b29d4f667f1e08da07c30fa9%7C523b4bfc0ebd4c03b2b96f6a17fd31d8%7C1%7C0%7C637830831629320472%7CUnknown%7CTWFpbGZsb3d8eyJWIjoiMC4wLjAwMDAiLCJQIjoiV2luMzIiLCJBTiI6Ik1haWwiLCJXVCI6Mn0%3D%7C2000&sdata=%2FElkOKZ%2FfB41LGqhhgSceI%2FzT46RLE%2Bm8He14QfG9To%3D&reserved=0>

Feel free to attach setup log also

-Colin

On Wed, Mar 16, 2022 at 8:21 PM Hans Vasquez-Gross <hva...@un...<mailto:hva...@un...>> wrote:
Hello,

About 1.25 years ago, I installed JBrowse1 for a new position and got it running with some custom plugins. Now that we have a racked webserver, I am trying to transfer those genomes to our new webserver. First step was to setup the latest JBrowse1 installation on the webserver. However, when running the setup.sh script, I am getting errors during the node.js dependencies setup.

Is there a particular version I should be using? I have Node v17.7.1 installed

I would be happy to send the full setup.log as well.

Thank you,
-Hans


--



[signature_998258195]

Hans Vasquez-Gross, Ph.D

Bioinformatics Scientist,
Nevada Bioinformatics Center

https://www.unr.edu/bioinformatics

hva...@un...<mailto:hva...@un...>

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