Re: [Gmod-ajax] JBrowse Update 1.3.3 to 1.3.5(latest release)

[Colin <col...@gm...>]

When I tried this locally, it upgraded successfully. You might try clearly
your cache and refresh page

# start with v1.3.3
jbrowse create -t v1.3.3 foldername
# upgrade to latest
jbrowse upgrade foldername

Note that v1.3.5 misreports as v1.3.4 (due to
https://github.com/GMOD/jbrowse-components/issues/2256) but it if you had
v1.3.3 and it now says v1.3.4 then it was a successful upgrade :)

-Colin

On Fri, Aug 27, 2021 at 10:13 AM Sunny Charan <cha...@gm...> wrote:

> Hi Colin,
>
> Thanks for responding so quickly.
>
> I ran "jbrowse upgrade jbrowse2/" and checked the JBrowse version, it
> still shows 1.3.3.
>
> Do I need to follow any other steps further?
>
> Please let me know with details.
>
> On Thu, Aug 26, 2021 at 6:14 PM Colin <col...@gm...> wrote:
>
>> Hi Sunny,
>>
>> Thanks for asking. If you have previously run e.g.
>>
>>     jbrowse create yourdirectory
>>
>> And this downloaded e.g. 1.3.3
>>
>> Then you should be able to now run
>>
>>     jbrowse upgrade yourdirectory
>>
>> And it will download the latest release and install it over your old
>> version
>>
>>
>> Alternatively, you could run
>>
>>     jbrowse create newdirectory
>>
>> And manually move some of the files (e.g. bam, bigwig, and config.json
>> file from the old directory) over into newdirectory
>>
>> Hope that helps
>> -Colin
>>
>> On Thu, Aug 26, 2021 at 5:55 PM Sunny Charan <cha...@gm...> wrote:
>>
>>> Hi,
>>>
>>> How to update Jbrowse 1.3.3 to 1.3.5 without uninstalling the
>>> existing version(1.3.3)?
>>>
>>> Please share with me detailed instructions. Thanks in advance!
>>>
>>> --
>>> Thanks,
>>> Charan
>>> _______________________________________________
>>> Gmod-ajax mailing list
>>> Gmo...@li...
>>> https://lists.sourceforge.net/lists/listinfo/gmod-ajax
>>>
>>
>
> --
> Thanks,
> Charan
>