[Gmod-ajax] can not load bam file

[Zieringer, J. <jul...@ib...>]

Hello,

my name is Julia and I am from Germany. I used snippy on a Galaxy server to identify variants between two genomes. Ti visualize the variants and coverage I want to import the fasta sequence file of my reference, the variants from the gff3 and the bam file to see the alignments in the desktop app of JBrowse. I can import the sequence fasta file of my reference and the corresponding gff3 file with the variants without a problem, however as soon as i want to load the bam (and Bam index file bai) it is not working.

I go to track (ater i loaded the genome sequence) and load both, the bam and bai file. Afterwards i simply click open and the import-window disapears but nothing is showing up?! I do not know what is going on... or if something is missing?

Thank you very much,
Julia