[Gmod-ajax] Organization of multiple samples in subfolders

[Ozturk, A. <Ahm...@um...>]

Hello,

I’m trying to set up JBrowse for the data in our lab for around 200 samples. I’m working on the documentation, however, some parts are not clear and I have some questions about the organization of data and conf files. What is the best practice for adding many tracks, grouped by researchers or datasets? I want people in the lab to compare their data to others. Is it a good practice to create folders for each researcher, and subfolders for each dataset containing 2 or more bam files and create subcategories in the main conf file? Also, is there a way to create individual conf files for each dataset/subfolder and include those in the main conf file so that it’s tidy and easy to maintain?

Thanks, Best,


Ahmet