Re: [Gmod-ajax] Description

[Scott C. <sc...@sc...>]

Hi Michal,

Yes, you can suppress the feature labels by adding "label" : false to the
style section of the trackList.json config section.

For adding a link for a feature, it is moderately more complicated and
depends on where you want it to link to.  This section of the docs will get
you started:


http://jbrowse.org/docs/mouse_configs.html#customizing-left-click-behavior-1

but you might need a javascript callback to get it working.  If it's not
obvious, please respond and give a description of what you'd like the link
to do and we can give you more help.

Scott


On Tue, Jul 30, 2019 at 10:03 PM Michał T. Lorenc <m.t...@gm...>
wrote:

> Hi,
> I have a GFF3 file with SNPs (please see below) and I loaded it into
> Jbrowse/Apollo with *flatfile-to-json.pl <http://flatfile-to-json.pl>
> --gff /efs/apollo/snps.fasta.m_snp.gff3 --compress --trackLabel "SNPs"
> --out /efs/apollo/ * .
>
>
>
> *##gff-version 3NbV1Ch01        SGSautoSNP      SNP     1245    1245    .
>       .       .
> Name=NbV1ChF00000000000000000001;ID=NbV1ChF00000000000000000001;Contig
> name=NbV1Ch01;SNP score=5;SNP pos. on scaffold=1245;Genotype
> L=26*T;Genotype Q=5*C;Changes=C/T*
> *NbV1Ch01        SGSautoSNP      SNP     1303    1303    .       .       .
>
> Name=NbV1ChF00000000000000000002;ID=NbV1ChF00000000000000000002;Contig
> name=NbV1Ch01;SNP score=4;SNP pos. on scaffold=1303;Genotype
> L=18*T;Genotype Q=4*A;Changes=A/T*
>
> [image: image.png]
>
> How is it possible to hide the SNP description and only show it when the
> user mouse over or click on the SNP? Additionally, when the SNP description
> appears would it be possible to add a click event to be redirected to a new
> page?
>
> Thank you in advance,
>
> Best wishes,
>
> Michal
>
>
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-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   scott at scottcain dot
net
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research