From: Colin <col...@gm...> - 2018-12-28 04:01:53
|
Hello all, A new JBrowse version is here! This is a minor release with just a couple of bugfixes and improvements. One interesting change allows the Hierarchical track selector to be much faster when loaded with very large track lists (e.g. thousands of tracks). Thanks to everyone for feedback and bug reports, even on Christmas day :) Happy holidays and enjoy browsing! - JBrowse-1.16.1.zip <https://github.com/GMOD/jbrowse/releases/download/1.16.1-release/JBrowse-1.16.1.zip> - minified release - JBrowse-1.16.1-dev.zip <https://github.com/GMOD/jbrowse/archive/1.16.1-release.zip> - use this if you modify jbrowse source code or use plugins - JBrowse-1.16.1-desktop-win32-x64.zip <https://github.com/GMOD/jbrowse/releases/download/1.16.1-release/JBrowse-1.16.1-desktop-win32-x64.zip> - JBrowse-1.16.1-desktop-linux-x64.zip <https://github.com/GMOD/jbrowse/releases/download/1.16.1-release/JBrowse-1.16.1-desktop-linux-x64.zip> - JBrowse-1.16.1-desktop-darwin-x64.zip <https://github.com/GMOD/jbrowse/releases/download/1.16.1-release/JBrowse-1.16.1-desktop-darwin-x64.zip> Blog post http://jbrowse.org/blog/2018/12/27/jbrowse-1-16-1.html Minor improvements - Made a change to make Hierarchical track selector much faster on initial browser load for very large tracklists (@cmdcolin <https://github.com/cmdcolin>) - Updated to webpack 4 for some faster build times (issue #1270 <https://github.com/gmod/jbrowse/pull/1270>, @cmdcolin <https://github.com/cmdcolin>) - Updated to use dojo/dijit/dojox 1.14 (@cmdcolin <https://github.com/cmdcolin>) - Updated NeatCanvasFeatures to allow non-coding transcripts to be colored differently with style->unprocessedTranscriptColor. Thanks to @billzt <https://github.com/billzt> for the bug report (issue #1298 <https://github.com/gmod/jbrowse/issues/1298>, @cmdcolin <https://github.com/cmdcolin>) Bug fixes - Fixed issue where data directories with spaces in them were giving errors due to CORS on JBrowse Desktop (issue #1285 <https://github.com/gmod/jbrowse/issues/1285>, @cmdcolin <https://github.com/cmdcolin>) - Fixed issue where the name store could be queried before being initialized (issue #1286 <https://github.com/gmod/jbrowse/issues/1286>, @cmdcolin <https://github.com/cmdcolin>) - Fixed an issue for large BAM headers failing to load post-@gmod/bam integration. Thanks to @nie-jeff for reporting (@cmdcolin <https://github.com/cmdcolin>) - Fixed access to some cross-origin resources (issue #1289 <https://github.com/gmod/jbrowse/issues/1289>, issue #1292 <https://github.com/gmod/jbrowse/pull/1292>, @cmdcolin <https://github.com/cmdcolin>) |