Re: [Gmod-ajax] local autoscale for coverage depth in Alignments2 tracks

[Colin <col...@gm...>]

The only thing I can really say is to stay tuned to the GitHub issue :) If
it has a github issue that has stayed open it is likely still on our radar


-Colin

On Fri, Sep 28, 2018 at 11:28 AM Loraine Guéguen <
lor...@sb...> wrote:

> Dear JBrowse team and list,
>
> The same Bigwig file in a track of type XYPlot and in a track of type
> Alignments2 (BAM display) with the coverage depth histogram is not
> displayed with the same scale. Whereas the scale in the XYPlot track
> looks fine (with autoscale=local), the scale in the coverage depth of
> the Alignments2 track is not suitable (too big).
>
> How is set the display scale for the coverage depth of the Alignments2
> track ?
> I would like to set "autoscale"="local" as in XYPlot tracks, but it
> seems it is not working (because of
> https://github.com/GMOD/jbrowse/issues/1164#issuecomment-410875923 ?)
>
> Thanks,
>
> Loraine Guéguen
>
> --
> Loraine Guéguen
>
> UMR8227 LBI2M (Laboratory of Integrative Biology of Marine Models)
> Plateforme ABiMS (Analyses and Bioinformatics for Marine Sciences)
>
> Station Biologique de Roscoff - CNRS | Sorbonne Université
> Place Georges Teissier - CS 90074
> 29688 Roscoff cedex
> tel: ++33 (0)2 98 29 56 46 (interne : 415)
> http://www.sb-roscoff.fr/en/laboratory-integrative-biology-marine-models
> http://abims.sb-roscoff.fr/
>
>
>
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