[Gmod-ajax] local autoscale for coverage depth in Alignments2 tracks

[Loraine G. <lor...@sb...>]

Dear JBrowse team and list,

The same Bigwig file in a track of type XYPlot and in a track of type 
Alignments2 (BAM display) with the coverage depth histogram is not 
displayed with the same scale. Whereas the scale in the XYPlot track 
looks fine (with autoscale=local), the scale in the coverage depth of 
the Alignments2 track is not suitable (too big).

How is set the display scale for the coverage depth of the Alignments2 
track ?
I would like to set "autoscale"="local" as in XYPlot tracks, but it 
seems it is not working (because of 
https://github.com/GMOD/jbrowse/issues/1164#issuecomment-410875923 ?)

Thanks,

Loraine Guéguen

-- 
Loraine Guéguen

UMR8227 LBI2M (Laboratory of Integrative Biology of Marine Models)
Plateforme ABiMS (Analyses and Bioinformatics for Marine Sciences)

Station Biologique de Roscoff - CNRS | Sorbonne Université
Place Georges Teissier - CS 90074
29688 Roscoff cedex
tel: ++33 (0)2 98 29 56 46 (interne : 415)
http://www.sb-roscoff.fr/en/laboratory-integrative-biology-marine-models
http://abims.sb-roscoff.fr/