Re: [Gmod-ajax] setting up jbrowse with a bacterial reference genome

[Robert B. <rb...@gm...>]

Hi Heewook,

I'll take a look.  Could you add this to the JBrowse issue tracker at
https://github.com/GMOD/jbrowse/issues?

Rob

On 02/27/2012 01:17 PM, Heewook Lee wrote:
> I have noticed all entries in gff when it's added to jbrowse via
> biodb-to-json.pl <http://biodb-to-json.pl/>, start index  always
> gets offset by 1. For example, if you have an entry in gff file and
> start and end is 1000 2000, when it's added on jbrowse, it will display
> as "start: 999, end: 2000. Why does this happen and are you aware of
> this? Thanks!