Re: [Gmod-ajax] [apollo-dev] JBrowse flatfiles off-by-one bug

[Mitch S. <mit...@be...>]

Bleh, should be fixed now in HEAD.  Thanks for the report.

Mitch

On 03/08/2011 06:29 AM, Gregg Helt wrote:
> As near as I can tell (by checking for splice site GT/AG consensus) 
> all of the subfeatures in JSON data files being generated from BED 
> files via flatfile-to-json.pl <http://flatfile-to-json.pl> have both 
> their start and end properties offset by -1 from what they should be.  
> This doesn't appear to be a new bug -- I've checked both the current 
> version of JBrowse and a version from last July, and it has this bug too.
>
> Gregg
>