From: Gregg H. <gre...@gm...> - 2011-03-08 11:30:03
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As near as I can tell (by checking for splice site GT/AG consensus) all of the subfeatures in JSON data files being generated from BED files via flatfile-to-json.pl have both their start and end properties offset by -1 from what they should be. This doesn't appear to be a new bug -- I've checked both the current version of JBrowse and a version from last July, and it has this bug too. Gregg |