From: Bernd J. <ber...@pa...> - 2011-01-25 10:23:18
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Hi, since I couldn't the flatfile-to-json.pl work with large bam file (apparently a known issue) and my problems with git, I now downloaded without git the jsongen-refactor branch. I wasn't able to find the lasyfeatures that are advertised in the tutorial either... With branch I now get "Can't use an undefined value as a HASH reference at ...JsonGenerator.pm line 164." I had a quick look at the source but couldn't see anything that I could possibly do to understand where this error message is coming from.. With some smaller test data I noticed that there are sometime problems with wig graphs that are not loaded completely and don't scale correctly. Are you aware of issues with wig files and line plots??? Otherwise, I would really to use jbrowse as I think it has some really cool features, but I also need a working solution VERY soon... Can you give me some advice in this respect as well? Thanks a lot for your kind help and support, Best, Bernd |