Hello all,
GMOD will have a stronger presence then ever at the Plant and Animal Genome
Conference (PAG 2011) <http://gmod.org/wiki/PAG_2011>, being held January
15-19 in San Diego. This includes, for the first time, *an all day GMOD
Workshop <http://www.intl-pag.org/19/19-gmod.html>* on Wednesday, January
19th, featuring extended talks on
- MAKER <http://gmod.org/wiki/MAKER>: An easy to use genome annotation
pipeline <http://www.intl-pag.org/19/19-gmod.html#MAKER>
- Galaxy <http://gmod.org/wiki/Galaxy>: Analyze, Visualize,
Communicate<http://www.intl-pag.org/19/19-gmod.html#Galaxy>
- JBrowse <http://gmod.org/wiki/JBrowse>: A Next Generation Genome
Browser <http://www.intl-pag.org/19/19-gmod.html#JBrowse>
- Tripal <http://gmod.org/wiki/Tripal>: A Construction Toolkit for Online
Genomic Databases <http://www.intl-pag.org/19/19-gmod.html#Tripal>
- GMODviews <http://gmod.org/wiki/GMODviews>: A web-based knowledge-base
and user-configurable interface for GMOD databases and tools, including
Tripal, GBrowse, and Chado
DBs<http://www.intl-pag.org/19/19-gmod.html#GMODviews>
- GBrowse_syn <http://gmod.org/wiki/GBrowse_syn>: The Generic Synteny
Browser <http://www.intl-pag.org/19/19-gmod.html#GBrowse_syn>
PAG 2011 <http://gmod.org/wiki/PAG_2011> will also feature workshops and
tutorials covering
- BioMart <http://gmod.org/wiki/BioMart>: Ensembl and Ensembl
Genomes<http://www.intl-pag.org/19/abstracts/W29_PAGXIX_188.html>
- GBrowse <http://gmod.org/wiki/GBrowse>: The Generic Genome Browser: A
Hands on Workshop for Installing, Configuring and Using Your Own
GBrowse<http://www.intl-pag.org/19/19-gbrowse.html>
- CMap <http://gmod.org/wiki/CMap>: Using Gramene: A Genomics and
Genetics Resource for Rice and other
Grasses<http://www.intl-pag.org/19/19-gramene.html>
Plus *at least 25 more
talks<http://gmod.org/wiki/PAG_2011#Projects_Using_GMOD_Components>and
posters <http://gmod.org/wiki/PAG_2011#Posters>* about or using Pathway
Tools <http://www.intl-pag.org/19/abstracts/C02_PAGXIX_903.html>,
GBrowse<http://www.intl-pag.org/19/abstracts/P08b_PAGXIX_828.html>,
Galaxy <http://gmod.org/wiki/Galaxy>, CMap <http://gmod.org/wiki/Cmap>,
Apollo <http://gmod.org/wiki/Apollo>, Chado <http://gmod.org/wiki/Chado>,
GBrowse_syn <http://gmod.org/wiki/GBrowse_syn>,
JBrowse<http://gmod.org/wiki/JBrowse>,
BioMart <http://gmod.org/wiki/BioMart>, MAKER <http://gmod.org/wiki/MAKER>,
Tripal <http://gmod.org/wiki/Tripal>, and the GMOD Evo
Hackathon<http://www.intl-pag.org/19/abstracts/P08a_PAGXIX_814.html>.
See http://gmod.org/wiki/PAG_2011 for a more complete list.
Many GMOD users<http://gmod.org/wiki/PAG_2011#Projects_Using_GMOD_Components>and
GMOD developers, including Stephen
Ficklin <http://gmod.org/wiki/User:Sficklin>
(Tripal<http://gmod.org/wiki/Tripal>),
Carson Holt <http://gmod.org/wiki/User:Carsonholt>
(MAKER<http://gmod.org/wiki/MAKER>),
Barry Moore <http://gmod.org/wiki/User:Bmoore>
(SOBA<http://gmod.org/wiki/SOBA>,
MAKER <http://gmod.org/wiki/MAKER>), Dan
Blankenberg<http://gmod.org/wiki/User:DanB>(
Galaxy <http://gmod.org/wiki/Galaxy>), Mitch
Skinner<http://gmod.org/wiki/User:MitchSkinner>(
JBrowse <http://gmod.org/wiki/JBrowse>), Ken Youens-Clark
(CMap<http://gmod.org/wiki/CMap>),
Mike Caudy <http://gmod.org/wiki/User:Mcaudy>
(GMODviews<http://gmod.org/wiki/GMODviews>),
Rob Buels <http://gmod.org/wiki/User:RobertBuels>
(Bio::Chado::Schema<http://gmod.org/wiki/Bio::Chado::Schema>,
GBrowse_syn <http://gmod.org/wiki/GBrowse_syn>), and Scott
Cain<http://gmod.org/wiki/User:Scott>(
Chado <http://gmod.org/wiki/Chado>, GBrowse <http://gmod.org/wiki/GBrowse>,
...) will be attending PAG this year. Please seek each other out.
Dave Clements <http://gmod.org/wiki/User:Clements>
Galaxy Project <http://gmod.org/wiki/Galaxy>
PS: In addition, three of the GMOD developers (Dan, Mitch, Scott) are
also available
to visit organizations in the San Diego
area<http://gmod.org/wiki/GMOD_News#GMOD_Roadshow_in_San_Diego>during
the meeting.
--
http://gmod.org/wiki/GMOD_Americas_2011
http://gmod.org/wiki/GMOD_News
http://usegalaxy.org/
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