Re: [Gmod-ajax] jbrowse and the canonical gene

[James C. <ca...@gm...>]

2009/11/15 James Casbon <ca...@gm...>:
> Now unfortunately, jbrowse doesn't render the CDSs correctly.  This is
> because there are multiple lines with the same ID which correspond to
> a spliced product that are shown as one giant CDS in jbrowse.
> Changing the IDs to be different allows jbrowse to render it
> correctly.

No, I just queried the GFF3 spec and apparently the canonical gene is correct.

jbrowse's rendering could be considered correct as the glyph does span
the entire feature.  I'm not sure it couldn't be improved though by
actually showing the component blocks in the same way as subfeatures.

James