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From: Dave C. G. H. D. <he...@gm...> - 2009-09-28 17:44:13
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Hello all, I am pleased to announce that DIYA and Tripal are now a part of the GMOD project. DIYA: The Do It Yourself Annotator DIYA is a modular and configurable open source pipeline framework, written in Perl, used (initially) for the rapid annotation of microbial genome sequences. The software is currently used to take nucleotide sequence contigs as input, either in the form of complete genomes or the result of shotgun sequencing, and produce an annotated sequence in GFF format. Current development seeks to integrate DIYA with the AMOS collection of assembly tools. See http://gmod.org/wiki/DIYA Tripal: A new Web Front End for Chado Tripal is a collection of Drupal modules that is already powering several web sites, including the Marine Genomics Project and Fagaceae Genomics Web. Tripal supports Drupal themes, page content and look and feel customization, materialized views, searching, and job management out of the box. Tripal can be downloaded from the GMOD SVN repository. Tripal (already!) has an extensive User's Guide and a tutorial to help users install, configure and extend Tripal. See http://gmod.org/wiki/Tripal Please welcome these projects, and their developers, to the GMOD community. Thanks, Dave C. -- * Please keep responses on the list! * http://gmod.org/wiki/GMOD_News * Was this helpful? Let us know at http://gmod.org/wiki/Help_Desk_Feedback |