From: Adhemar <az...@gm...> - 2009-09-24 13:06:47
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Hi All, I'm a newbie on using jbrowse and I'm quite excited with its functionalities. The installation ran smoothly and it's working 100% if I follow the 'Getting Started With JBrowse' tutorial. The thing is that I couldn't create a new jbrowse instance using a GFF file. It's not working even with the example file (volvox.gff). I wonder if you could help me figure out what's going on. My PC is a Fedora 11 i386 + bioperl 1.6 + JSON 2.15. Here is the error message: [localuser@localhost temp]$ bin/flatfile-to-json.pl -gff file.gff --autocomplete all working on seq Seq1 -------------------- EXCEPTION -------------------- MSG: segment() called in a scalar context but multiple features match. Either call in a list context or narrow your search using the -types or -class arguments STACK Bio::DB::SeqFeature::Store::segment /usr/local/lib/perl5/site_perl/5.10.0/Bio/DB/SeqFeature/Store.pm:1298 STACK toplevel bin/flatfile-to-json.pl:152 ------------------------------------------- Thanks in advance. Adhemar |