[gmod-cmap] importing a .gff

[Andrew C. <aco...@gm...>]

Hi,

I'm having trouble importing a .gff into cmap.  Using the  
cmap_admin.pl, I select import data, .gff, give it the file name (it  
says it reads it correctly) I select the species and map set and it  
goes to work reading in the data.  It reads in all the data and the  
purges the caches.

When I check CMAP, it doesn't even display the species in the drop  
down menu.

Looking at the database using DBVis, cmap_species table seems to  
contain the correct information, cmap_map_set seems to contain the  
correct information, but cmap_feature does not contain any of the  
features that it should have read in from the .gff file.

The only differences I can see from when I imported data before and  
this time, is that this time i'm using a .gff rather than a cmap tab- 
delimited file and that this map is a 'physical' map rather than a  
'genetic' one.

Any thoughts?

Thanks,
-Andrew