From: Andrew C. <aco...@gm...> - 2009-04-01 18:59:55
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Hi, I'm having a problem displaying correspondences on my system. I created an evidence type called 'Ortholog_Detection' in my config file: ------ <evidence_type Ortholog_Detection> evidence_type_acc OD evidence_type Otholog Detection rank 1 color lightblue ribbon_color blue line_type direct evidence_default_display display <aggregated_correspondence_colors> 1 lightblue 20 blue 0 darkblue </aggregated_correspondence_colors> </evidence_type> ------ and then imported a list of the correspondences, a subset of which looked something like this: ------ feature_name1 feature_acc1 feature_name2 feature_acc2 evidence is_enabled g1 Map1-g1 g1a Map1-g3a Ortholog_Detection 1 g2 Map1-g2 g2a Map1-g2a Ortholog_Detection 1 g3 Map1-g3 g3a Map1-g3a Ortholog_Detection 1 ----- I restarted the webserver and purged all the caches using the cmap_admin.pl. I can see both maps, and add them left and right etc, but I can't see any correspondences between them (Ortholog_Detection is selected as 'use' under the correspondence options). If I view the feature details and select 'correspondence details' it shows both corresponding markers. Any idea why it's not drawing lines between them? Any help would be appreciated. Thanks, -Andrew |