Re: [gmod-cmap] Help: Error at Name-based Correspondence

[Scott C. <cai...@gm...>]

Hi Amy,

Could your server have been running out of memory?  It is possible
that the operating system killed MySQL to keep the whole computer from
crashing.  You should check your syslog for messages about mysql.

Scott


On Thu, Oct 9, 2008 at 2:54 AM, Lee Amy <ope...@gm...> wrote:
> Hello,
>
> I encountered an error while I'm doing name-based correspondence, it's about
> MySQL. This error occurred suddenly and after running a long time.
>
> The error is:
>
> DBD::mysql::db selectall_arrayref failed: MySQL server has gone away at
> /usr/lib/perl5/site_perl/5.8.8/Bio/GMOD/CMap/Data/Generic.pm line 3008,
> <STDIN> line 16.
> DBD::mysql::db selectall_arrayref failed: MySQL server has gone away at
> /usr/lib/perl5/site_perl/5.8.8/Bio/GMOD/CMap/Data/Generic.pm line 3008,
> <STDIN> line 16.
>
> Could you tell me how to fix that?
>
> Huge thanks to you.
>
> Best Regards,
>
> Amy Lee
>
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-- 
------------------------------------------------------------------------
Scott Cain, Ph. D.                                   cai...@gm...
GMOD Coordinator (http://gmod.org/)                     216-392-3087
Ontario Institute for Cancer Research