From: Brian O'C. <boc...@uc...> - 2004-05-11 19:52:57
|
Allen Day wrote: >On Tue, 11 May 2004, Scott Cain wrote: > > > >>On Tue, 2004-05-11 at 12:59, Lincoln Stein wrote: >> >> >>>A cluster of 4 nodes is not really going to be adequate for decent >>>cross species comparison. It would make a great test bed for a >>>prototype MOD web site, though. You would designate one of the nodes >>>to run the database, another to run the web site, a third to run >>>BLAST, and a fourth for developing the next release. >>> >>>I think we can make a good argument for making the cluster into a >>>hardware reference platform for a generic MOD, and skip the cross >>>species comparison altogether unless someone like Jason thinks that >>>we could an all-against-all BLAST across six species on a 4-node >>>cluster in reasonable time. >>> >>>I'm willing to do the writeup if I get to have the system in my >>>office. >>> >>> >>:-) I was thinking in my basement. I suppose it may not be heavy duty >>enough to do all v all BLASTs (although, if it were BLASTP, it might >>have a shot). The app could say that it could be used as test cluster >>for determining needs for bigger (imply, Apple) cluster. >> >> > >i was thinking in our server room, we have gigabit uplink :). i agree >that we can make a strong argument here for a GMOD site test bed. i do >think though that lincoln would be an appropriate person to spearhead the >application composition with his superb writing skillz. > >-allen > I was just saying we need to get a Mac to test the GMOD install :-) --Brian |