From: Mark G. <mg...@us...> - 2005-04-28 18:44:30
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Update of /cvsroot/gmod/apollo/src/java/apollo/gui In directory sc8-pr-cvs1.sourceforge.net:/tmp/cvs-serv3507/src/java/apollo/gui Modified Files: FeatureTreePanel.java Log Message: so peptide ids(accs) & names(formerly displayId) were being erroneoulsly lumped on name changes. now settting of transcript name ONLY changes the peptide name, peptide acc/id is left untouched. split out a new PEPTIDE_ID subpart. next i need to add changing peptide id on id changes. renamed SequenceI. displayId to name - if this is contentious its trivial to switch it back - but i found displayId confusing - its really a name i think (and once peptides become features thats what it will be). Index: FeatureTreePanel.java =================================================================== RCS file: /cvsroot/gmod/apollo/src/java/apollo/gui/FeatureTreePanel.java,v retrieving revision 1.65 retrieving revision 1.66 diff -C2 -d -r1.65 -r1.66 *** FeatureTreePanel.java 13 Sep 2004 23:26:01 -0000 1.65 --- FeatureTreePanel.java 28 Apr 2005 18:43:47 -0000 1.66 *************** *** 299,303 **** if (seq != null) { label = sf.getType() + ! (seq.getDisplayId() != null ? ": " + seq.getDisplayId() : ""); } else { label = sf.getType() + --- 299,303 ---- if (seq != null) { label = sf.getType() + ! (seq.getName() != null ? ": " + seq.getName() : ""); } else { label = sf.getType() + |